Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1719 ATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCTCTAAGGCATGCATTAGTGGGATTGCCAGGTGTTAATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCAGCTGCTATTGTCATGAGAACGGTTAGGAACACTGTAGACACTGGAAGAACAGTTGTTTGTACAATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGCTTTTTCTAATGAAGCAAGGGGGGCAAGAGATATATGTGGGGCCACTTGGACTTCATTCTTCCAATTTAATTACTTACTTTGAGGAAATCCAAGGTATCGGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAATCACAAGTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCCGAGGTGTACAAAAATTCAGAGTTATACAGGAGAACTAAAACACTTGTTATAGAATTGAGTACTCCATCTCCTGGTTCGAAAGACCTCTATTTTACTTCACAGTACTCAACTTCCTTCTTCACCCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGCAATGCTCAATACACTGCCCTAAGATTTCTATACTCAACTACTGTTGCTGTTTTGCTTGGGAGCATGTTTTGGAACCTAGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGCTATGGGCTCCATGTATGCTGCTGTTCTCCTTCTTGGTATTAAGAATTCTAAATCAGTGCAGCCAATAGTTGTCGTTGAGCGGACAATCTTTTACAGGGAAAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCCCAGGTTCTGATAGAACTCCCCTATGTACTTGGACAAGCTGCAGTCTATAGCATTATAATTTATGCAATGATTGGTTTTGAGTGGACTGTGGCTAAATTTTTTTGGTGCCTATTCTTCATGTACTTTACCTTCCTGTACTTCACCTACTATGGAATGATGGCAGTGGCAGTGACCCCTAACCAACACATCTCCGGTATAGTTTCTGATGGATTTTATTCAGTGTGGAATATCTTCTCAGGATTCATAGTCCCACGGCCAAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCACTTTGTTGGAGTTTGTATGGTTTGGTGGCTTCACAATATGGAGATATAAAGCAAAGCATTGAATCCAGTGATGGGACAACAACAGTGGAAAGCTTTGTGAGAAGTTACTTTGGTTTCAAACATGATTTTCTTGGAGTGGTTGCAGCTGTGATGGTTGCATTCACAGTAGTTTTTGCATTGGTCTTTTCCATATCAGTGAAAATGCTTAATTTCCAGCGGCGTTAG 1431 0.4067 MFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKQGGQEIYVGPLGLHSSNLITYFEEIQGIGKIKDGYNPATWMLEITSSAKEMELGIDFAEVYKNSELYRRTKTLVIELSTPSPGSKDLYFTSQYSTSFFTQCMACLWKQHWSYWRNAQYTALRFLYSTTVAVLLGSMFWNLGSKIEKQQDLFNAMGSMYAAVLLLGIKNSKSVQPIVVVERTIFYRERAAGMYSAFPYAFAQVLIELPYVLGQAAVYSIIIYAMIGFEWTVAKFFWCLFFMYFTFLYFTYYGMMAVAVTPNQHISGIVSDGFYSVWNIFSGFIVPRPRIPVWWRWYSWANPLCWSLYGLVASQYGDIKQSIESSDGTTTVESFVRSYFGFKHDFLGVVAAVMVAFTVVFALVFSISVKMLNFQRR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1719 476 Pfam ABC-2 type transporter 201 415 IPR013525 GO:0016020|GO:0140359
Pvu1g1719 476 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 476 - -
Pvu1g1719 476 Gene3D - 2 119 IPR027417 -
Pvu1g1719 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 118 IPR027417 -
Pvu1g1719 476 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1719 Pvu-Chr1 42677521 42679899 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1719 K08711 - pvu:PHAVU_001G1659001 934.865