Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1718 ATGGAGGGTGCGGGCAGTTTCAGGAATGGTAGTTCATCCATTTCGAGGGACAGTGATGCGGATATCTTCTCAAACTCATTCCACAAAGAGGATGATGAAGAGGCTCTCAAATGGGCTGCCATTCAGAAACTTCCCACCGTTTCGCGTATGAGGAAAGCTTTGTTCACTTCACCCGAAGGGCAAGTGAATGAGATTGATGTGCACAAACTTGGGTTGCAAGAAAGGAGAGCTTTACTTGAAAGACTGATCAGAACTTCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGCTAAGGGAGCGAATTGATAGAGCTGGAATTGATCTTCCGACAATAGAGGTTCGGTTTGAGAACTTGAATGTCGAAGCAGAAGCTAGTGTAGGAACTAGAGCTTTGCCTACCTTCGCTAACTTCATGGTTAATATTGTGGAGGGTATGTTGAACTCTCTTCATATTCTACAAAGTAGAAAACAACATATACATATTCTCCAGGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTTTTGGGCCCTCCATGTTCCGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAGACTTGATCCAAAGTTAAAGTTTTCTGGTAAGGTGACTTATAATGGTCATGGGATGGATGAGTTTGTACCCCAAAGAACTGCAGCATATGTCAATCAAAATGATCTTCATATTCCAGAGTTGACGGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCGTTATGATTTGCTTGCAGAATTGTCGAGAAGAGAAAAAGAGGCAAATATCATGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCAAATTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACAGTTGTAGGAAATACAATGTTAAGGGGGATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAGATGCTGGTTGGACCAGATAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCATTGTGTTCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCGCCCGAGACTTACAATCTTTTTGATGACATTATTTTACTCTCTGATAGTCATATAGTGTACCAGGGTCCCCGCGAATATGTGCTTGAATTTTTCGAATCAATGGGTTTTCAATGTCCCGAGAGAAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGGGCACATAAAGATCAACCTTATAGATTTGTCAGAGCTAAAGAATTCTCAGAGGCACTCAAGTCATTTCATGTTGGGAGAAGCCTTCGAGAAGAACTTGATAGTGAATTTGACAAGTCTAAAAGTCACCCAGCTTCTTTGACAACCAAAAAGTTTGGAGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATTAAGAGATTATTTACTTATGAAGCGTAATTCATTTGTTTACACCTTCAGGCTGACCCAACTTGCTGTAATGGCATTTATTAACATGACAATCTTCCTCCGGACTGAGATGCGTAGAGACTCAGTGACTGATGGTGGGATATATGTTGGTGCATTGTTCTATGGTCTTTTTGTGATGATGTTCAATGAATTTCCTGAACTTGCCATGGTCGTTTTAAAGCTTCCTATTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTTCCTGCATGGATCCTAAAAATCCCTATAACTTTTCTAGAAGTTGCTGTGTGGCTATTCCTAACCTACTATGTCATTGGATTTGATCCAAATATTGGAAGATTTTTTAGACAATACCTTGTTCTTTTACTAGTGAACCAGATGTCTTCCGCATTATTCCGATTTCTTGCAGGAGTTGGGAGGGAATTGAAAGCAGCTTTCACACTTGGGTCATTTATACTGACCATCCTTTTTGCTATGAGTGGTTTTATCCTATCAAAAGACAACATAAAAAAATGGTGGTTATGGGGCTTCTGGATATCACCTATGATGTATGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCGGAGAGATGGAGACATGTTCTACCTAACTCTTCGGAGCCTCTTGGAGTCGAAGTTTTGAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTCTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTTACGTATTTGAGCACACCTGGGAATAAACAGGCCTTTATATCCGAAGAACTTGAAAACAATGAGCAAAATGGTGGTAGTAATAAAGGAACTAATGTTATGAGATACATAAAATATAACTTCACTGGTCACTCAACTAAAGTGAGAAATGGCGAAAGTATATGTGGAAATACATCTTCCCATGCTTTTCCCTCTAGCTATAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGAATTGTTGAGAATAAATTGGTTCTTTTGAAGGGTGTCACTGGCTCCTTTAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTTACCGGAGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACTGGAGGATATGTTGGAGGGAACATCACAATCTCTGGGTATCAGAAGAAGCAAGAAACATTTGCAAGAATTTCAGGATACTGTGAGCAAAACGACATCCACTCTCCTCATGTTACTGTGTATGAATCCTTGCTTTATTCAGCATGGCTCAGATTGTCCTCAGACATCAATGCTCAAACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCTCTAAGGCATGCATTAGTGGGATTGCCAGGTGTTAATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCAGCTGCTATTGTCATGAGAACGGTTAGGAACACTGTAGACACTGGAAGAACAGTTGTTTGTACAATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGCTTTTTCTAATGAAGCAAGGGGGGCAAGAGATATATGTGGGGCCACTTGGACTTCATTCTTCCAATTTAATTACTTACTTTGAGGAAATCCAAGGTATCGGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAATCACAAGTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCCGAGGTGTACAAAAATTCAGAGTTATACAGGAGAACTAAAGTACTTGTTACAGAATTTAGTACTCCATCTCCTGGTTCAAAAGACCTTTATTTTCCATCACAGTACTCAACTTCCTTCTTCACCCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCACAATCCTCAATACACTGCCCTAAGATTTTTATACTCAACTATTGTAGCTGTTTTGCTTGGGAGCATGTTTTGGAACCTTGGCTCAAATATTGAAAAGCAACAGGATCTTTTCAATGCCATGGGCTCCATGTATGCTACTGTTCTCCTTCTTGGAGTTAAGAATTCTAATTCAGTGCAGTCAGTAGTTGCTGTTGAGCGGACAGTCTTTTATAGGGAAAGAGCAGCTGGAATGTATTCAGCATTTCCATATGCTTTTGCCCAGGTTCTGATTGAGGTCCCGTATGTACTTGGACAAGCTGTAGCCTATAGCATTATAATTTATGCAATGATTGGTTATGAGTGGACAGTGGCTAAATTTTTCTGGTGCCTATTCTTCATGTACTTTACCTTCCTGTACTTCACCTACTATGGAATGATGGCAGTGGCAGTGACCCCTAACCAACACATCTCCGCTATAGTTTCTGCTGGATTTTATGCAGTGTGGAATATCTTCTCAGGATTCATAGTCCCACGGCCAAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCAATTTCTTGGAGTTTGTATGGATTGGTGGCTTCACAATATGGAGATATAAAGCAAAGCATTGAATCCAGTGATGGGACAACAACAGTGGAAGGCTTTGTGAGAAGTTACTTTGGTTTCAAGCATGATTTTCTTGGAGTGGTTGCAGCTGTGATGGTTGCATTCACGGTTGTTTTTGCATTGGTCTTTGCTATATCAGTGAAAATGTTTAATTTCCAGCGGCGTTAG 4332 0.4077 MEGAGSFRNGSSSISRDSDADIFSNSFHKEDDEEALKWAAIQKLPTVSRMRKALFTSPEGQVNEIDVHKLGLQERRALLERLIRTSEEDNEKFLLKLRERIDRAGIDLPTIEVRFENLNVEAEASVGTRALPTFANFMVNIVEGMLNSLHILQSRKQHIHILQDVSGIIKPGRMTLLLGPPCSGKTTLLLALAARLDPKLKFSGKVTYNGHGMDEFVPQRTAAYVNQNDLHIPELTVRETLAFSARVQGVGTRYDLLAELSRREKEANIMPDPDIDVYMKAVATEGQKANLITDYVLRILGLETCADTVVGNTMLRGISGGQKKRLTTGEMLVGPDKALFMDEISTGLDSSTTFQIVNSLKHCVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLEFFESMGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVRAKEFSEALKSFHVGRSLREELDSEFDKSKSHPASLTTKKFGVGKWELLKACLLRDYLLMKRNSFVYTFRLTQLAVMAFINMTIFLRTEMRRDSVTDGGIYVGALFYGLFVMMFNEFPELAMVVLKLPIFYKQRDNLFFPSWAYALPAWILKIPITFLEVAVWLFLTYYVIGFDPNIGRFFRQYLVLLLVNQMSSALFRFLAGVGRELKAAFTLGSFILTILFAMSGFILSKDNIKKWWLWGFWISPMMYGQNAMVNNEFLAERWRHVLPNSSEPLGVEVLKSRGFFIQSYWFWIGVLVLIGYTLLFNFGYILALTYLSTPGNKQAFISEELENNEQNGGSNKGTNVMRYIKYNFTGHSTKVRNGESICGNTSSHAFPSSYRGMVLPFEPHSITFDEVTYAVDMPQEMRNQGIVENKLVLLKGVTGSFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYVGGNITISGYQKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSSDINAQTRKMFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKQGGQEIYVGPLGLHSSNLITYFEEIQGIGKIKDGYNPATWMLEITSSAKEMELGIDFAEVYKNSELYRRTKVLVTEFSTPSPGSKDLYFPSQYSTSFFTQCMACLWKQHWSYWHNPQYTALRFLYSTIVAVLLGSMFWNLGSNIEKQQDLFNAMGSMYATVLLLGVKNSNSVQSVVAVERTVFYRERAAGMYSAFPYAFAQVLIEVPYVLGQAVAYSIIIYAMIGYEWTVAKFFWCLFFMYFTFLYFTYYGMMAVAVTPNQHISAIVSAGFYAVWNIFSGFIVPRPRIPVWWRWYSWANPISWSLYGLVASQYGDIKQSIESSDGTTTVEGFVRSYFGFKHDFLGVVAAVMVAFTVVFALVFAISVKMFNFQRR* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1718 1443 Pfam Plant PDR ABC transporter associated 715 778 IPR013581 -
Pvu1g1718 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Pvu1g1718 1443 CDD ABCG_PDR_domain2 840 1078 IPR034003 -
Pvu1g1718 1443 Pfam ABC transporter 871 1023 IPR003439 GO:0005524
Pvu1g1718 1443 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Pvu1g1718 1443 Gene3D - 843 1083 IPR027417 -
Pvu1g1718 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Pvu1g1718 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 843 1095 IPR003439 GO:0005524
Pvu1g1718 1443 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1443 - -
Pvu1g1718 1443 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1443 - -
Pvu1g1718 1443 Gene3D - 148 459 IPR027417 -
Pvu1g1718 1443 Pfam ABC-2 type transporter 377 471 IPR043926 GO:0140359
Pvu1g1718 1443 Pfam ABC-transporter N-terminal 67 137 IPR029481 -
Pvu1g1718 1443 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Pvu1g1718 1443 Pfam ABC-2 type transporter 1168 1382 IPR013525 GO:0016020|GO:0140359
Pvu1g1718 1443 SMART AAA_5 171 396 IPR003593 -
Pvu1g1718 1443 SMART AAA_5 880 1072 IPR003593 -
Pvu1g1718 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 859 1078 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1718 Pvu-Chr1 42655993 42663978 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1718 K08711 - gmx:732607 2424.82