Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1707 ATGCTGCTAAGAAGCTCTTCAACTCCAGTTCTTGGATCCCTCCTTTCTAACTTCACAGATAGTCCTAACAACAATATTCACTCAGAATCCAGTCATGCACCTAAACACCTTCCACCAACCAGCTTCCCCCAACATTATCACAAGCTTTATGTCCACCAAACTGGGTCCTTCACTCACCCTTCCTTCTCATGTGGTTCTTCTCCAATCTCTCCCTCGATCGGTGAGCTTGAAAGGCAAAACAAAGGCTTTAGAAGAGTTCAATCTGATGGGAACTTGCAAGACTTAGCCTACTCTTGCAACAATGAAGACATTTTGGAATTTTCCGAGCCTCCTAAGAGGTTTTCAACGAGGAACAGGTGCTTAGTGCTGGAGACCATTCCTTCTTTCTCGGTGGGTAAGCACAATGGCTTGCGTGTAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGCGAAGATGGGGAGGAGAAGAAAGGAGAGGGGTTGAGTGTGGTGAATGGAGTGGTATTGAGTGAAGGTGGGAAAGCTGAAGATGGAGTTTGCAGGGTGAGTTTTGGTGAGCAGGAAGAGGTTGGTAGTGGTAAAGAAATGTATCTTGCAAAGGGGCTTGGTGTAGAGTGCTGTGGGGATGGCATAGGTGGCTGCATAGGGGGTGGTGGAGGTAGCAGTGATCAAAATCCTTTGGGTTCTGGAGGGAATGGAGATAGGCATGAAGTGGAGGAATTTTACAAGAAAATGGTGAAAGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCTAATTTTTTGTATCAGTGCAAACAGGATCTTGAAGGAGCAGAGGAGTACTATTCCCGTGCCATACTGGCAGACCCAAATGATGGAGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGGTACACCATGACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAGTCCAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCATATGCTAGTTTCCTATGGGACGCAGAGGAAGAGGAGGATGGTAACAATGAACCACAGTGTTTACCGCCTCATTCTCATCAAGGAGCTATGGCTACAGCAGGTGCTTGA 1092 0.4643 MLLRSSSTPVLGSLLSNFTDSPNNNIHSESSHAPKHLPPTSFPQHYHKLYVHQTGSFTHPSFSCGSSPISPSIGELERQNKGFRRVQSDGNLQDLAYSCNNEDILEFSEPPKRFSTRNRCLVLETIPSFSVGKHNGLRVEEEDEEMESESEDGEEKKGEGLSVVNGVVLSEGGKAEDGVCRVSFGEQEEVGSGKEMYLAKGLGVECCGDGIGGCIGGGGGSSDQNPLGSGGNGDRHEVEEFYKKMVKENPGDPLFLRNYANFLYQCKQDLEGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDQERASSYFERAVQASPEDSHVHAAYASFLWDAEEEEDGNNEPQCLPPHSHQGAMATAGA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1707 363 SMART hat_new_1 233 265 IPR003107 GO:0006396
Pvu1g1707 363 SMART hat_new_1 303 335 IPR003107 GO:0006396
Pvu1g1707 363 SMART hat_new_1 268 300 IPR003107 GO:0006396
Pvu1g1707 363 Gene3D Tetratricopeptide repeat domain 231 344 IPR011990 GO:0005515
Pvu1g1707 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 347 - -
Pvu1g1707 363 MobiDBLite consensus disorder prediction 134 160 - -
Pvu1g1707 363 MobiDBLite consensus disorder prediction 340 363 - -
Pvu1g1707 363 SUPERFAMILY TPR-like 233 340 IPR011990 GO:0005515
Pvu1g1707 363 PANTHER OSJNBA0004N05.2 PROTEIN 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1707 Pvu-Chr1 42543460 42546322 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1707 - - gmx:100788436 510.76