Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1705 ATGGCAGATAGTGAATCCGTTGTCACTGAAGCATCTGCTCATTCCGCTGCTGAGACGTATGCTTCGGCTGGTTATGCCGAGTCTGGGTCAAATCCTGCTCTTGAGGCAGGTACTACTGTTGATGAACCTGCTGGAGAAGGTGCACAGTCCACTTCAACCTATGAATATGGTTATTCTAATACTGGTGATGTGAATGCGTATACTGGGGATCCGAATTCTGTTTTACAACAAGCCCAATTCAATGCAACTGGAGATACCAAGCCAGCTGGTGGACTTCCTGATGCTAACGAGGCCTCTGCTGCGGTTGGAAACACTGCTGCTGAACCTGCTCTGGTTTCTGACTACAGTTCATCTGTCAATGGTGGTGTAGTCGGTGCAGTGGCAAATTCTGCTGGACTTGAAAACGGAAATGCGTTGGAAAACGTTGACGGGTCAGCTGATGAAAAACAACTCGCAGATGGCTACGCAGCCTTGTCTGCTGAGGAAGATCGACTATGGAATATTGTACGAGCTAATTCTTTAGATTTCAGTGCCTGGACTTCCTTGATTGAAGAGACCGAGAAGGTAGCCGAGGACAATATTCTGAAGATTCGAAGAGTTTATGATTCCTTTCTAGCAGAATTTCCCTTGTGCTATGGTTATTGGAAGAAATATGCCGACCATGAGGCACGACTTGGCTCTATAGATAAAGTTGTTGAAGTGTATGAGCGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTCGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGCACGCCTTGCCATAATTTACACCAGAATATTAGAGAATCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAGGAGTTAGCTGGAAACCGACCTTTGTCAGAGTTACGAACTACTGAAGAAGCTGCTGTAAGTGTTGCTTCTGAGGCTGCTGGACAAGGTACCGAGGGAGAGGTTCATCCTGATGGTGCAGAGAATTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATCTATAAAAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCCGGAGGCCCTATTTTCATGTACGGCCTCTCAATGTTGGAGAGCTTGAAAATTGGCACAACTATCTGGATTTTTTAGAAAGAGAAGGGGACTTAAGCAAGATTGTCAAGTTGTATGAGAGGTGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGCTATGTTTTGTGCATGGAAGCCAGTAGAAGCATGGATCTTGCAAATAATGTTCTTGCCCGAGCCACCCAAGTCTTTGTTAAGAGACAAGCTGAGATACATATTTTCTGTGCCCGGTTTAAGGAGCAGAATGGAGATATTGATGGTGCTAGAGCTGCGTATCAACTTGTGCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACACCGATTGGGAAAAATGGAGGATGCGTTCTCCTTGTATGAACAGGCTATTGCTATCGAGAAAGGAAAAGAACATTCACAAACATTGCCGATGTTGTTTGCTCAGTATTCTCGATTTGTATATTTGGCTTCTGGGAATGCAGAGAAGGCTAGACAAATTTTAGTTGAGGGACTGGAGAATGTTTTGTTGTCAAAACCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTTTCCAAAGCGAGTAGATATTGACTTTCTGGAGTCATGGGTTTGCAAATTCATAATGCCTAACTCAGAGAGTCCTGGTGTAGCAAGTGCAATTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTCCAATCGATCAAGAGGGCCGAGGATAGGCATGCGAAATTGTTTTTGCCACACAGAAGCATGACAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAACTTCAGACAAAGTAAAAGTGTCAAGAACGTATTCTGTTCAATCACCTGCCCAATCTGTGATTGGTGCGTATCCAAATGCACAGAACCAATGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCGGTTACACAAGCACAAGGGCAACAATGGACTGCTGGCTACACCCAGCAGGCTTCCTATGGTGCTTACGCTGGATATGGCGGCAATTATGCAAATTCTCAATTGCCTGCATCAGTTCCCCCAAGTACTGCATACGGAGCTTATCCTCCTTCATATCCTGCACAGCCGGCGGTTCCTCAACAAAACTATGCGCAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2487 0.4403 MADSESVVTEASAHSAAETYASAGYAESGSNPALEAGTTVDEPAGEGAQSTSTYEYGYSNTGDVNAYTGDPNSVLQQAQFNATGDTKPAGGLPDANEASAAVGNTAAEPALVSDYSSSVNGGVVGAVANSAGLENGNALENVDGSADEKQLADGYAALSAEEDRLWNIVRANSLDFSAWTSLIEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTTEEAAVSVASEAAGQGTEGEVHPDGAENSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFLEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASRSMDLANNVLARATQVFVKRQAEIHIFCARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIRHANMEHRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPFPKRVDIDFLESWVCKFIMPNSESPGVASAIEREELSSIFLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMTELKKRHAEDFLTSDKVKVSRTYSVQSPAQSVIGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPASVPPSTAYGAYPPSYPAQPAVPQQNYAQPVAAPAQQPAAVPQAYYGSYY* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1705 828 MobiDBLite consensus disorder prediction 348 373 - -
Pvu1g1705 828 Gene3D Tetratricopeptide repeat domain 419 718 IPR011990 GO:0005515
Pvu1g1705 828 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 59 814 - -
Pvu1g1705 828 SMART hat_new_1 226 258 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 584 616 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 192 224 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 298 331 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 543 578 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 261 296 IPR003107 GO:0006396
Pvu1g1705 828 SMART hat_new_1 439 471 IPR003107 GO:0006396
Pvu1g1705 828 PANTHER PRE-MRNA-PROCESSING FACTOR 39 59 814 - -
Pvu1g1705 828 SUPERFAMILY TPR-like 169 685 IPR011990 GO:0005515
Pvu1g1705 828 MobiDBLite consensus disorder prediction 26 56 - -
Pvu1g1705 828 Gene3D Tetratricopeptide repeat domain 167 334 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1705 Pvu-Chr1 42522454 42531552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1705 K13217 - gmx:100787373 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1705 1 42522454 42531552 Pvu1g1705 1 42522454 42531552 ECH