Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1695 ATGATGGCAATGGAAGAAGAAAAAGGGTTTGCAAGTAGTGGAAGAGAGGATGACTACACCAAAGATGGCACAGTGGACCTCAAAGGTAAACCAGTTTTAAGATCAAATACTGGAAGATGGAGAGCTTGTTCCTTCATTGTAGGGTATGAAATGATTGAAAGAATGGCATACTATGGGATAGCATCAAATCTAGTGTTGTATCTAACAGAGAAGCTCCATGAGGGCACTGTCAAATCTTCAAAGAGTGTTACCAATTGGACTGGTGCAGTCTGGATCATGCCAGCTGCCGGAGCTTATATTGCCGATGCCTATCTTGGTCGCTATTGGACCTTTCTTATAGCATCAGCCATTTACCTTTTGGGAATGTGTTTGTTGACTCTAGCAGTGTCAGTACCAGGATTGAGACCACCAGCATGTGCTTCAGGCGTTGCAGACCAAGATTGCCCACAAGCATCGTCATTGCAAGTGGGAATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGGACCAAGCCCAACATTTCTACAATGGGAGCAGACCAATTTGACGAGTTTGAACCCAAAGAGAGGTCCCAAAAGCTTTCCTTCTACAATTGGTGGGTGTTCAATATTCTAATTGGAACCATTTCCGCCCAAACTCTCTTGGTTTACATACAAGACAGAGTTGGTTTTGAACTTGGTTATGGGATCCCAACCATTGGCCTAGCCTTTTCAATATTGATGTTTCTGCTAGGAACTCCTCTTTATAGGCATAGATTACCCTCAGGGAGCCCTTTAACCAGGATGGCCCAGGTACTTGTGTCTGCAGTGAGGAAGTGGAAGGTACATGTCCCAGATGATTTGAATGAGCTACATGAGCTCAGCATGGAAGAGTATTATGCAAGTAAAGGGAGAACAAGAATTTATCACAGTTCTTCATTAAGATTCCTGGACAAAGCTGCAGTGAAGACAGGCGAAACATCACCATGGATGCTTTGTACTGTGACTCAAATTGAGGAAACCAAGCAAATGATGAAAATGGTTCCTATTTTGATTACTACATGCATTCCAAGCACCATAATAGCTCAAACCACCACACTCTTCATCAGACAAGGCACCACACTGGACAGGGGAATGGGACCCCATTTTAAAATTCCTCCAGCATGTCTCATAGCTTTTGTAAACATCTTCATGCTGATAAGCGTTGTGATCTATGACCGCCTTTTCGTTCCTGCAATCCGGCACTACACCAAGAACCCCAGAGGGATTTCCCTTCTGCAGAGACTTGGAATTGGCCTTGTGCTACATGTTATCATAATGCTCACTGCATGCTTTGTTGAGAGGAAGAGACTGAGTGTGGCAAGAGAAAACAACCTTTTAGGCCAGCTTGATAAAATTCCTCTAACCATTTTCATCCTCCTCCCTCAGTTTGCTTTGACAGGAATTGCTGATACCTTTGTTGATGTTGCTAAGTTGGAGTTCTTCTATGATCAAGCACCAGAAACCATGAAAAGTTTGGGAACGTCATATTTCACAACCACCTTGAGCATTGGAAATTTTCTTAATAGTTTTCTACTTTCAACTGTTGCTGATCTCACCCACAGACATGGTCACAAGAGTTGGATTTTGGATAATCTAAATGCCTCCCGTTTAGATTATTATTATGCATTCTTGGCCCTGCTAAGCGTAATCAACTTCTTTTGCTTTGTGGCTGTTGCCAAATTGTACGTCTATAATGGTGATGAAACACAAATCAGCATGGACTTGGATATGAACCCTAATACTAGAATAACCCCAAGTACCACACAACCAGATAACTGA 1809 0.4279 MMAMEEEKGFASSGREDDYTKDGTVDLKGKPVLRSNTGRWRACSFIVGYEMIERMAYYGIASNLVLYLTEKLHEGTVKSSKSVTNWTGAVWIMPAAGAYIADAYLGRYWTFLIASAIYLLGMCLLTLAVSVPGLRPPACASGVADQDCPQASSLQVGIFFFALYIIAAGTGGTKPNISTMGADQFDEFEPKERSQKLSFYNWWVFNILIGTISAQTLLVYIQDRVGFELGYGIPTIGLAFSILMFLLGTPLYRHRLPSGSPLTRMAQVLVSAVRKWKVHVPDDLNELHELSMEEYYASKGRTRIYHSSSLRFLDKAAVKTGETSPWMLCTVTQIEETKQMMKMVPILITTCIPSTIIAQTTTLFIRQGTTLDRGMGPHFKIPPACLIAFVNIFMLISVVIYDRLFVPAIRHYTKNPRGISLLQRLGIGLVLHVIIMLTACFVERKRLSVARENNLLGQLDKIPLTIFILLPQFALTGIADTFVDVAKLEFFYDQAPETMKSLGTSYFTTTLSIGNFLNSFLLSTVADLTHRHGHKSWILDNLNASRLDYYYAFLALLSVINFFCFVAVAKLYVYNGDETQISMDLDMNPNTRITPSTTQPDN* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1695 602 PANTHER PEPTIDE TRANSPORTER 22 584 - -
Pvu1g1695 602 CDD MFS_NPF5 40 574 IPR044739 GO:0042937|GO:0042938|GO:0071916
Pvu1g1695 602 Pfam POT family 108 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g1695 602 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g1695 602 SUPERFAMILY MFS general substrate transporter 30 568 IPR036259 -
Pvu1g1695 602 Gene3D MFS general substrate transporter like domains 11 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1695 Pvu-Chr1 42452582 42455512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1695 17 590 Organic Solute Cotransporters AT5G46040 58.087 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1695 - K14638 gmx:100787001 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1695 1 42452582 42455512 Pvu7g2832 7 51265415 51270496 PCT