Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1688 ATGGAAGAGAGAGTGAATTGTCACCCATTGCTGAGAGGAGGTAGAAGAGAGAAAGGTTACAGCCATGGTTTATCCACTTCTCAGATGCATGTCATGGCTTCCATATGTAACACCCTCTTTCCTTCCCTGCCATTAAACCCACTCACCAACGAAACTTCACAACCTCTCTCACCCTGCTACAATAATACCTCTGCTTCCCATGAGGCTGCAGAGCTGTTGCACAAGAGGGTTGTGCCAGAAGCATTGTCCCTGGTGGGTTGGGTTCTTTGGATGCTGTCCTTCAGATTGGGGACACTGTTGATCTGTGGAAGACTTTGCTTGGACTGGAAGTGGCCTTTCATTCACAAGTTCTCTGAGATCTCCTTGGAGAAGAGAGAAGAGATTCTCAGAAACTGGTCCAGAGAAAAGCGTTGGGTGCCCCTGCGGTTAGTGTTTGTGCTCATCAAACTTATCTTCTTCTGCACTTTCTTCTCTAGGAGTGATGAAAATGGACATAATCCCGTATGGAAAGCAATTGGGTACCAGGTGGACACCAAGAAAAAGTTGGTACGGAAGGAGAGGCCTCTAGAAAAGGGATTAATAGAGACTATGCACGAAACTGATCATACTTTGATGCAATCCCTCGCTGAAAAAGGCCTTGAAGTTAGTGAAGATAAACTGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGTGGAGGTGTTGCAGCTGCAGTTCTTGCAAACTCTGGTCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTACTTTGTTTCCCATGATTATTCTTCCCTGGAAGGACCATCCATGGACGAGCTATACGAATCAGGTGGCATTCTGTCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACTGTGGGTGGCGGCTCTGCTATAAATTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAATGCTCTGACTATCAATCTGCCATGGACTCGGTATGCAGAAGGATTGGTGTGACAGAGAAGTGCAAGAAAGAAAGCTTTCAGAATCGAGTTCTCATACAAGGATGTGAGAAAATGGGCTTCAAAGTAGAGTCAGTGGCTACAAATTCCTCAGCAGATCATTATTGTGGTTCATGCTGTTATGGTTGTAGGACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGAAATGGTGCAGTGATCCTCTCTGGATGTAAAGCTGAAAGATTCATACTTGAAGATGGAAATGATGGAATGAAGAAAAAGAAATGTTTAGGAGTGATTGCAGCAGCAACTTGGAGGAGTAAGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAACTATTTCAGCATGTGGCTCTCTGTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCAGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGCGGCAACAACCATGAAGGTGGGATCATAACTTCGATCCACAAGGTACTTGCAGAAGATTCCACCCCAAGATTCATCATAGAAACACCTGCTCTAGGACCAGGATCATTTTCAGCATTGGTTCCCTGGCTTTCAGGGCATGATATGAAAGACAGGATGGCAAAGTATGCAAGAACTGCTAACATTTTTGCATTGATAAGAGACCATGGATCAGGAAAAGTGAAGGCTGAAGGAAGAGTCACTTACAGACTTGACCAAGTAGACAAAGAAAACCTCAGAATTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGCACATACAGGAGTGATGGACAAAGATTCAAATGTAGGGGGGTCAAGGAGGAAGATTTAGAGGAGTTTCTTGATACTGTCAAAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTGTTGACATCTGCACATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCAGTTGATGAAACTGGTGAGAGTTGGGAAGCAAAAGGGTTGTATGTGTGTGATGGGAGTGTTTTGCCCACTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCTACAGCATACTGCATTGCCAGCAAGATTGCAGAATCACTTAACAAAGACAAACAAACCATAAATAAATAG 2190 0.447 MEERVNCHPLLRGGRREKGYSHGLSTSQMHVMASICNTLFPSLPLNPLTNETSQPLSPCYNNTSASHEAAELLHKRVVPEALSLVGWVLWMLSFRLGTLLICGRLCLDWKWPFIHKFSEISLEKREEILRNWSREKRWVPLRLVFVLIKLIFFCTFFSRSDENGHNPVWKAIGYQVDTKKKLVRKERPLEKGLIETMHETDHTLMQSLAEKGLEVSEDKLQNLYKVKCDVVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVSHDYSSLEGPSMDELYESGGILSSLDGKMMILAGSTVGGGSAINWSACIRTPDSVLRECSDYQSAMDSVCRRIGVTEKCKKESFQNRVLIQGCEKMGFKVESVATNSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILSGCKAERFILEDGNDGMKKKKCLGVIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGNNHEGGIITSIHKVLAEDSTPRFIIETPALGPGSFSALVPWLSGHDMKDRMAKYARTANIFALIRDHGSGKVKAEGRVTYRLDQVDKENLRIGLRKALRILVAAGAVEVGTYRSDGQRFKCRGVKEEDLEEFLDTVKIVGGPRSRNELWTVLTSAHQMTSCRMGATEEEGAVDETGESWEAKGLYVCDGSVLPTAVGVNPMVTIQSTAYCIASKIAESLNKDKQTINK* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1688 729 Pfam GMC oxidoreductase 229 485 IPR000172 GO:0016614|GO:0050660
Pvu1g1688 729 Gene3D - 635 720 IPR036188 -
Pvu1g1688 729 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 5 724 - -
Pvu1g1688 729 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 5 724 - -
Pvu1g1688 729 PIRSF Lg_Ch_AO 10 726 IPR012400 GO:0046577
Pvu1g1688 729 Pfam GMC oxidoreductase 578 711 IPR007867 GO:0016614
Pvu1g1688 729 Coils Coil 717 729 - -
Pvu1g1688 729 Gene3D - 214 515 IPR036188 -
Pvu1g1688 729 SUPERFAMILY FAD/NAD(P)-binding domain 227 722 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1688 Pvu-Chr1 42381936 42385188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1688 1 724 Acyl Lipid Metabolism Gene Families AT4G28570 57.067 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1688 K17756 - gmx:100808951 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1688 1 42381936 42385188 Pvu1g1688 1 42381936 42385188 ECH