Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1685 ATGAATGGATTTTACAAAAGACAACTTGCTTCTCCTCCTGCAATTGATTTTTCTTCTGATGATGGGAAGGAACTTTTTCTTGAAGCCATTCACAATGGAACCATGGAAGGCTTTTATAAGTTGGTTTCCCACTTCCAAACACAATCCGAACCTGCTTTCTGCGGTCTCGCTAGCTTGTCCATGGTCCTCAATGCTCTTGCCATTGATCCTGGCAGGAAGTGGAAAGGGCCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAATCTCTAGAGAATGTCAAAGTTAAGGGCATCACGTTTGGGAAGCTCGTGTGTTTGGCTCAATGTGCTGGAGCTAAAGTTGATTCCTTTCGTGCTAGCCATTGCAGCATTGATGATTTTCGTAAATATGTCATCAAGTGTTCAATATCTGATGACTGTCACCTGATCTCCTCATACCACAGAGCTGCCCTTAAGCAAGAAGAGGTATTGAAACAGGTACAGGAGACTGGCCTTTTCAAACATGTAGCTTCCTTTTTGTCAAATTCTTGCAGCAGGGAATCATTAGATGATGAAGATGCGTTACCTGTCATCGCTGCAAGTGTTTGTTGCCAAGCAGCAGAAATTTTAGCTTGGAAGCCTTGCTCACCAGCCGGGTATAGATGTCAAGTAACATGTATGAAACGCTTGAAAGCCGAAGATGACAAGCCAATAACAATGGTTTCTGGGACTGTGGTAAATGGTAACACTGAGCAAGGGGTTGATGTGTTGGTTCCTTCATCATGTAGGAAATTATGCTGCAGTTGCTCTAGGCCCAGTGATTATATGAGGATGCATCCAGCTAGCATGGATGTGCTAACAGTGCTTCTACTGTCCTTACCATCGACAACATGGGCTGGCATCACAGATAAGCAGCTTTTGACAGAAATACACGGTCTGGTTTCAACTGAAAACCTTCCCTCTTTGCTTCAAGAAGAGGTTCTGCACTGA 975 0.4379 MNGFYKRQLASPPAIDFSSDDGKELFLEAIHNGTMEGFYKLVSHFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCESLENVKVKGITFGKLVCLAQCAGAKVDSFRASHCSIDDFRKYVIKCSISDDCHLISSYHRAALKQEEVLKQVQETGLFKHVASFLSNSCSRESLDDEDALPVIAASVCCQAAEILAWKPCSPAGYRCQVTCMKRLKAEDDKPITMVSGTVVNGNTEQGVDVLVPSSCRKLCCSCSRPSDYMRMHPASMDVLTVLLLSLPSTTWAGITDKQLLTEIHGLVSTENLPSLLQEEVLH* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1685 324 Pfam Domain of unknown function (DUF1984) 127 324 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Pvu1g1685 324 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 226 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Pvu1g1685 324 Pfam Phytochelatin synthase 4 156 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Pvu1g1685 324 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 155 IPR040409 GO:0016756|GO:0046872|GO:0046938
Pvu1g1685 324 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 155 324 IPR040409 GO:0016756|GO:0046872|GO:0046938
Pvu1g1685 324 Gene3D - 14 179 IPR038156 -
Pvu1g1685 324 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 155 324 - -
Pvu1g1685 324 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 155 - -
Pvu1g1685 324 SUPERFAMILY Cysteine proteinases 11 174 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1685 Pvu-Chr1 42363210 42366861 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1685 K05941 - gmx:547627 273.092