Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1683 ATGAACATCTTCTCCAAGAAACCCACTGCCAAAGAGGCCCTTCGTGAGAGTAAACGAGAAATGGCGAACGCCACTAGAGGTGTGGAGAAGGAAATTGGAGCACTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAGAGAACTGCTAAGACAGGCAATGAGGCAGCTACTAAAATTCTAGCACGCCAGTTGGTCAGGCTTAGGCAACAAATTGCGAATCTTCAAGGTAGTAGAGCTCAGATGAGAGGCATAGCAACTCACACGCAGGCGATGCATGCCCATTCTTCTGTTGCTGTTGGCATGAAAGGCGCTACAAAGGCAATGGCAGCTATCAATAAGCAAATGGAACCAGCTAAGCAGGCTAAAATTATACAGGACTTCCAGAAACAATCAGCACAGATGGATATGACTACTGAAATGATGTCGGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAAACCGATGAACTGACAAATCAGGTGCTGGATGAAATTGGTGTGGATGTTGCCTCACAGTTATCAGCCGCTCCCAAAGGGAGAGTTACAACAAAGAATACGGAAGATGTTAGCAGCTCGGGCATTGACGAACTTGAGAAGCGTTTGGCAGCTCTTAGAAACCCATAA 639 0.4554 MNIFSKKPTAKEALRESKREMANATRGVEKEIGALQLEEKKLLAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAINKQMEPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETDELTNQVLDEIGVDVASQLSAAPKGRVTTKNTEDVSSSGIDELEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1683 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
Pvu1g1683 212 MobiDBLite consensus disorder prediction 177 212 - -
Pvu1g1683 212 Gene3D - 4 181 - -
Pvu1g1683 212 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g1683 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Pvu1g1683 212 MobiDBLite consensus disorder prediction 196 212 - -
Pvu1g1683 212 MobiDBLite consensus disorder prediction 181 195 - -
Pvu1g1683 212 Pfam Snf7 16 185 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1683 Pvu-Chr1 42352427 42355795 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1683 K12192 - gmx:100306343 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1683 1 42352427 42355795 Pvu1g1683 1 42352427 42355795 ECH