Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1672 ATGGAGCGCTTGAAGCTGGCGCAACTGGGGGAGAGGCTCAAGACGGGTGGGGCCCAGATGGGGCGAATGGTCAGCGGCAAGGTCAAGGAAATGCTGCAGGCTCCCACGCCGGAGTCCAAGATGGTCGACGAGGCCACGCTTGAAACCATGGAGGCTCCTAATTGGGGCATCAATCTCAGGATATGTGCCATGATCAACGCCGACCAATTTAACGGCTCCGAGGTCGTTAAGGCCATCAAGAGGAAGATCAACCACAAGAGCCCTGTCGTTCAGACTCTTAGCCTCGACCTCTTGGAAGCCTGCGCCATGAACTGCGACAAGGTCTTCTCCGAAATCGCTTCCGAGAAGCTTCTTGATGACCTTGTTCGCTTCATTGATAACCCGCAGGCCCACCACGACACTCGACGTCGGGCTTTCCAGTTGATTCGGGCCTGGGGCGACTCCGAGGATCTTGCTTATCTTCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGATGGTCCACTTGACATGGCGGGAGGAAATTCACCACCTATTCCGTATGCCTCAGAGTCACATGCAAATCAATATCCTGTAGATCCCCCTGAAAGATACCCAATTCCTGAAGCTGAACTAGATATGGATGATCCCGCGGCTTTCTCTTCGACTTACCAACACATATCAGTTGAGGAGAAGAAAGAGCATCTTGTGGTTGCTCGGAATAGTCTCGAATTGCTCTCTAGCATATTGAATTCTGAGGCTGAGCCAAAACCTTTGAAGGAAGATTTAACTGTGAGCTTGTTGGGTAAGTGCAAGCAATCACTCTCTATCATCAAGGGGATTGTGGAAAGCACTACAAATGATGAAGCAACGCTTTTTGAGGCTTTATATCTCAATGATGAGCTTCAGCAGGTAGTTTCTAACTATGAGGAGTTAGAAGCTGCTCAAATGTCTGGGACACAACAACCTCAAAATGCTGAACCCGCCAAGCATGATGCGGAAGCTGTTCAAAATCCCAATGAAGTACCTGCAAAGTTTGAAATTGATGAATCAGAAGAATCTGAAGCTGATCAGAATCTGGATCGAAAGGTGCCCCAAAAATCTAACACTCTTGAAGTCAATGCAACTGAGGCTGAGGGGAATGATGTTGCTGAAACTAAAATAGTTAATGACACAAAGGACAAGAACGGTGAATCTAGCTTCAAGCGAGATGCTGAATGA 1206 0.4809 MERLKLAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEAPNWGINLRICAMINADQFNGSEVVKAIKRKINHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKLLDDLVRFIDNPQAHHDTRRRAFQLIRAWGDSEDLAYLPVFRQTYMSLKGRDGPLDMAGGNSPPIPYASESHANQYPVDPPERYPIPEAELDMDDPAAFSSTYQHISVEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTNDEATLFEALYLNDELQQVVSNYEELEAAQMSGTQQPQNAEPAKHDAEAVQNPNEVPAKFEIDESEESEADQNLDRKVPQKSNTLEVNATEAEGNDVAETKIVNDTKDKNGESSFKRDAE* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1672 401 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Pvu1g1672 401 MobiDBLite consensus disorder prediction 309 401 - -
Pvu1g1672 401 Gene3D - 28 183 IPR008942 -
Pvu1g1672 401 SUPERFAMILY GAT-like domain 186 308 - -
Pvu1g1672 401 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Pvu1g1672 401 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Pvu1g1672 401 MobiDBLite consensus disorder prediction 379 401 - -
Pvu1g1672 401 CDD VHS 39 165 - -
Pvu1g1672 401 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Pvu1g1672 401 Pfam VHS domain 39 148 IPR002014 GO:0035091|GO:0043130
Pvu1g1672 401 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Pvu1g1672 401 Gene3D - 218 311 IPR038425 -
Pvu1g1672 401 PANTHER TOM1-LIKE PROTEIN 1 1 365 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pvu1g1672 401 PANTHER TOM1-LIKE PROTEIN 2 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1672 Pvu-Chr1 42162700 42165383 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1672 - - gmx:100803803 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1672 1 42162700 42165383 Pvu1g1672 1 42162700 42165383 ECH