Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1667 ATGGATATGGAGAAGAAAGAGGGTGAAGCCTCCCTGTTGTGGTTCGAAACCTCGGACTCTGTTTGTAGCCGACACAAGTTTGAACCCGATGGTCGACTCTCCGTTGTGATTGTTGATGATTCCAGGCCTTTCTACCAAAGGGTGGTGGGATCTTTCATGAATAAATTTTTCCCCTCGGGATATCCATACAGTGTGAATGAAGGCTATCTTAGATACACACAGTTTCGAGCTCTGCAACATGTTACCAGTGCAGCGCTATCGGTGCTATCAACTCAGTCCTTACTATTTGCTGCAGGGTTGCGGCCCACACCTGCACAAGCGACAGCTGTTAGTTGGATTTTGAAGGATGGAATGCAACATGTAGGAAAGTTGATCTGTAGCAATTGGGGTGCTAGAATGGATTCTGAACCTAAACGTTGGAGACTGCTAGCTGATGTTCTCTATGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCACATCTTTTTCTTGAAGTGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCAGTTGTGGCAGCAAGAGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTTATAGGAATTGGAGTTGGAATTCAATTAGCATCTACTATCTGTGCATCAATGCAGGGAAAGTTAGTTGCGGGTCCTCTCCTTTCAATTATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTGAATCCACGAAGAACGGCAATGGTGGTGGATGATTTTCTCAAGGCAGGAGTTGTTTCAAGCCCTTCTGATCTAAGATATAGGGAAAATCTGCTGTTTAATCTGCAACTGAAAGAAGACACGGGAAATGTAAGAGTAGGGAAGGCTGTGCACAAGGCCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCATGATGAGAAGTTTCTTTTAAACTTAGGGAATAAATGCATTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCACTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAACTTGTGAGTTCCTCTCGTCATGAGCTCAGTGCTAGTGTTCTGCATGAGGCTTATGAGAAAATGAATGGTGTGTTTCCTATATTCTTGAAAGAATTACAGAACAAAGGGTGGTACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTATAG 1260 0.431 MDMEKKEGEASLLWFETSDSVCSRHKFEPDGRLSVVIVDDSRPFYQRVVGSFMNKFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLCPHLFLEVAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASTICASMQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVDDFLKAGVVSSPSDLRYRENLLFNLQLKEDTGNVRVGKAVHKAIKPSRLLELKQVFHDEKFLLNLGNKCIDMVLEQDASGEDALRGWLVAAYAAQLVSSSRHELSASVLHEAYEKMNGVFPIFLKELQNKGWYTDRFLDGTGSRFAL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1667 419 Pfam Vitamin B6 photo-protection and homoeostasis 47 278 IPR006968 -
Pvu1g1667 419 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 5 418 - -
Pvu1g1667 419 PANTHER RUS1 FAMILY PROTEIN C16ORF58 5 418 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1667 Pvu-Chr1 42121287 42125177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1667 - - gmx:100804154 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1667 1 42121287 42125177 Pvu1g1667 1 42121287 42125177 ECH
Pvu1g1667 1 42121287 42125177 Pvu7g1985 7 43064618 43068708 PCT