Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1651 ATGTCGAACCCTCAAGATCAGAAACCATGGAAGGCGGAATACGCGAAGTCGGGGCGATCGTCATGCAGGACGTGCAAGAACCCCATTGCCACCGAATCGCTGCGTCTCGGCAAGATGGTCAAATCCTTCAAGTTCGATGGCATCATGCCCATGTGGAATCATGCTGCTTGCGTCTTGGAGAAAGCCAATCAGATAAAATTAGTTGACGATGTTGAAAACTTAGAGTCGCTTCGTTGGGAAGATCAGCAGAACATCAGAAAATACATAGAGAGTGGCGGCAGCAGCAGCACTGCCACAAAATCAGGCTCAAAAGATGTCAAGGAAACTGAATGTGCTATTGAAGTTTCGCAGACTTCTCGTGCTACTTGTAGGGATTGCAGTCAAAAAATTATCAAAGGAGAGGTTCGTATATCTACTAAGCCTGATGGTTCAGGCGCAAGAGGTTTGGCTTGGCACCATGCCAAGTGTCTCATGGAATTATCGCCATCAATTCAAGTGGATAAGTTATCTGGATGGAATAGTCTTTCATCTTCTGATCAATCAGCTGTCAGTGACTTCGCTAACAAGGGTCATCCGATGAACAAGGGGGGTGTTAGTGGTACAAACATTGAGACTGAAAAGGGTGAAGAATCCACACAACTACACACTTCCAGAGGTGGTATAAAACGAGGGAAAGATGCCGACAGTGAGCGAAAATCAAAAGTTGCTAAGGTCAAGGGAGATGTGTCCGCCAGCAGTGCAGTGTCAGTGAAAAATTATAATGAAACCGGGGAAGCATGTGATCTGGAGAAGAAAATGGAAATCCAGAGCAAAGAAATCTGGGCTCTGAAGGATGATCTAAAAAAGAATGTGACAACACCAGAGTTGCGCGAAATGCTGGAAGCCAATGATCAAGATTCAACAGGATCAGAACTTGATTTACGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGTCTTTGCCCAATATGTTCTGGATTTCTGCGTCACTCTGGAGGAATGTACCGTTGCAATGGATACATTTCCGAGTGGAGTAAATGTTCTTACTCTACCTGCGAATCAAAACGTGTTGAAGGGAAGTGGAAAATCCCAGAAGAAACAAAGAATCAATACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTAGGATATTGCCTCTTCCATCACCAAGAAAGTCTGCTGAAAGTCAAATTACTGCTAGTCAGCATCAATCATCACACTCTGAAAATTTCCGAGATATCAAAGTTGCTATCTGTGGATTAGCTAATGACACTATTAAGGAATGGAAAAGCAAAATTAGTGCCATGGGTGGAATGTTTCATGCAAAAGTAAAGAAAGATACTAACTGCTTGGTGGTTGGTGGAGTGCTCAATGATGAAGCTGAGATGGGGAAGGCAAGGAGGATGAAAATACCAATAGTCAGAGAGGACTACTTGATTGACTGCATACAAAGAAAGAAGAGACTTCCATTTGATATGTACAAGGTTGAAATGATTGGTGAGGCTTCTAGCATGGTCACCATTAAAGTGAAGGGACAAAGTGCTGTTCATGAGGCTTCTGGCCTACAAGAGTCTGGCCACATACTTGTGGAAGGGAAAAGCATATATAACACAACTTTGAATATGTCTGATTTGTCTACTGGTATTAACAGTTACTACATTCTCCAGATAATCCAAGAAGATAAGGGGTCAGATTGCTCTGTGTTTCGTAAATGGGGTCGAGTAGGAAATGACAAGATTGGAGGAAGTAAACTGGTGAATGAAATGTCAAAATCTGATGCAATCTGTGAATTCAAACGATTATTCTTTGTGAAGACTGGAAACCCTTGGGAGGCATGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTTTTCCCACTGGATATTGATTATGGTGTTAACAAACAGATGTCAAAAAAGAAAAGAAATGACAATGACAGCAAACTACCCGTGCCATTAATAGAATTGATTAAGATGCTCTTCAATGTAGAAACTTACAGATCTGCCATGATGGAGTTTGAGATTAATATGTCTGAAATGCCACTTGGGAAACTAAGCAAAAGCAATATCCAAAAGGGGTTTGAAGCATTGACGGAGATACAGAATCTGTTAAAAACGACTAGTCCGGATCCATCAGTCAAGGAAAGCTTACTTATTAATGCCAGCAACCGGTTCTTCACCATGATCCCTTCTATTCATCCACATATTATTAGGGATGAGGATGATTTTAAGTCCAAGGTGAAAATGTTAGAAGCCCTTCAAGATATTGAAATAGCCTCTCGATTAGTTGGATTTGATGCCAACAACGAGGACTCAATTGACGATAGTTATAAGAAGCTTCACTGTGATATATCTCCACTTCCTCATGATAGTGAAGATTTTTGTTTAATTGAAAAGTTTCTCCATAATACACATGCCCCTACTCATACGGACTGGAGTCTTGAGCTGGAAGAAGTTTTTTCACTTGAAAGGGAAGGTGAATTTGATAAGTTTGCTCCTTACAGGGATAAACTTGGAAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACAAACTTTGTGGGCATTCTTAGCCAAGGACTCAGAATTGCACCTCCTGAAGCCCCCGCGACTGGCTATATGTTTGGCAAAGGGGTGTACTTTGCTGACCTGGTCAGCAAAAGTGCCCAGTATTGCTTCACTGATAAGAAAAATCCTATTGGTCTAATGCTTTTGAGTGAAGTTGCACTCGGAAACATCTATGAGCTCAAGAAAGCTAAGTATATGGATAAACCTCCCGAAGGAAAGCACTCTACTAAAGGACTGGGCAAGAAAATGCCTCAAGAATCGGAATGTGCAAAGTGGAGAGGCAATGTGACTGTTCCTTGTGGCAAACCAGTGCCATCAAATGTCAAGGCTTCTGAGCTCATGTACAATGAGTACATTGTTTATAATACTGCCCAAGTTAAGATGCAGTTCTTGTTGAAGGTGAGGTTTCATCACAAGAGATGA 3009 0.4177 MSNPQDQKPWKAEYAKSGRSSCRTCKNPIATESLRLGKMVKSFKFDGIMPMWNHAACVLEKANQIKLVDDVENLESLRWEDQQNIRKYIESGGSSSTATKSGSKDVKETECAIEVSQTSRATCRDCSQKIIKGEVRISTKPDGSGARGLAWHHAKCLMELSPSIQVDKLSGWNSLSSSDQSAVSDFANKGHPMNKGGVSGTNIETEKGEESTQLHTSRGGIKRGKDADSERKSKVAKVKGDVSASSAVSVKNYNETGEACDLEKKMEIQSKEIWALKDDLKKNVTTPELREMLEANDQDSTGSELDLRDRCADGMMFGALGLCPICSGFLRHSGGMYRCNGYISEWSKCSYSTCESKRVEGKWKIPEETKNQYLKKWFKSQKGKKPVRILPLPSPRKSAESQITASQHQSSHSENFRDIKVAICGLANDTIKEWKSKISAMGGMFHAKVKKDTNCLVVGGVLNDEAEMGKARRMKIPIVREDYLIDCIQRKKRLPFDMYKVEMIGEASSMVTIKVKGQSAVHEASGLQESGHILVEGKSIYNTTLNMSDLSTGINSYYILQIIQEDKGSDCSVFRKWGRVGNDKIGGSKLVNEMSKSDAICEFKRLFFVKTGNPWEAWEQKTIQKQPGRFFPLDIDYGVNKQMSKKKRNDNDSKLPVPLIELIKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLKTTSPDPSVKESLLINASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNEDSIDDSYKKLHCDISPLPHDSEDFCLIEKFLHNTHAPTHTDWSLELEEVFSLEREGEFDKFAPYRDKLGNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPIGLMLLSEVALGNIYELKKAKYMDKPPEGKHSTKGLGKKMPQESECAKWRGNVTVPCGKPVPSNVKASELMYNEYIVYNTAQVKMQFLLKVRFHHKR* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1651 1002 Gene3D BRCT domain 406 508 IPR036420 -
Pvu1g1651 1002 MobiDBLite consensus disorder prediction 389 412 - -
Pvu1g1651 1002 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 111 185 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 PIRSF NAD_ADPRT 3 1002 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Pvu1g1651 1002 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 SMART zf_PARP_3 114 188 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 Pfam PADR1 (NUC008) domain 309 358 IPR012982 -
Pvu1g1651 1002 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 106 - -
Pvu1g1651 1002 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 110 197 - -
Pvu1g1651 1002 ProSiteProfiles BRCT domain profile. 411 501 IPR001357 -
Pvu1g1651 1002 SUPERFAMILY ADP-ribosylation 786 1001 - -
Pvu1g1651 1002 Gene3D - 319 379 IPR038650 -
Pvu1g1651 1002 Gene3D - 106 208 IPR036957 GO:0003677|GO:0008270
Pvu1g1651 1002 Gene3D - 2 105 IPR036957 GO:0003677|GO:0008270
Pvu1g1651 1002 ProSiteProfiles PARP catalytic domain profile. 777 1002 IPR012317 GO:0003950
Pvu1g1651 1002 CDD parp_like 653 997 - -
Pvu1g1651 1002 SUPERFAMILY WGR domain-like 509 635 IPR036930 -
Pvu1g1651 1002 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 MobiDBLite consensus disorder prediction 397 412 - -
Pvu1g1651 1002 Pfam WGR domain 541 620 IPR008893 -
Pvu1g1651 1002 SMART WGR_cls 541 625 IPR008893 -
Pvu1g1651 1002 ProSiteProfiles WGR domain profile. 530 630 IPR008893 -
Pvu1g1651 1002 SUPERFAMILY BRCT domain 413 501 IPR036420 -
Pvu1g1651 1002 MobiDBLite consensus disorder prediction 185 238 - -
Pvu1g1651 1002 Pfam BRCA1 C Terminus (BRCT) domain 413 488 IPR001357 -
Pvu1g1651 1002 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 114 185 IPR001510 GO:0003677|GO:0008270
Pvu1g1651 1002 SMART BRCT_7 413 491 IPR001357 -
Pvu1g1651 1002 Gene3D - 246 318 - -
Pvu1g1651 1002 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 996 - -
Pvu1g1651 1002 MobiDBLite consensus disorder prediction 219 238 - -
Pvu1g1651 1002 Gene3D - 787 1002 - -
Pvu1g1651 1002 SMART PADR1_2 307 360 IPR012982 -
Pvu1g1651 1002 Pfam Poly(ADP-ribose) polymerase catalytic domain 797 998 IPR012317 GO:0003950
Pvu1g1651 1002 PANTHER DNA LIGASE 50 996 - -
Pvu1g1651 1002 Gene3D - 642 786 IPR036616 GO:0003950
Pvu1g1651 1002 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 653 787 IPR036616 GO:0003950
Pvu1g1651 1002 CDD WGR_PARP1_like 531 637 - -
Pvu1g1651 1002 ProSiteProfiles PARP alpha-helical domain profile. 652 770 IPR004102 GO:0003950
Pvu1g1651 1002 Pfam Poly(ADP-ribose) polymerase, regulatory domain 653 783 IPR004102 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1651 Pvu-Chr1 41821630 41831195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1651 K24070 - gmx:100800968 1769.98