Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1630 ATGGCAACCATCATCGCCGGCAGCCCAACAACATCAATTTCTCGATCAGGTCTTGTGCTCAAGCGACCTTTTGGGGTCTCATCCTCTACCGTTCTTGCAATGAGTAGGGCAGGGAAAGTGAGGTGCTCCATGGATGAAAAGCCTTCCGTGCAGGAAAACAGTTCAAATGTGGGAATGGGAGCATCCTTGCTAGCAGCTGCATGCGCCGCAACCATGTCAAGCCCAGCCATGGCTTTGGTGGATGAGAGACTGAGCACTGAAGGGACAGGGCTTCCCTTTGGGCTTAGCAACAACCTTCTTGGTTGGATTCTGTTCGGTGTCTTTGGTCTTATATGGGCTCTCTACTTTGTCTACACTTCCAGTCTTGAAGAGGATGAAGAGTCTGGATTGTCCCTCTAA 399 0.5063 MATIIAGSPTTSISRSGLVLKRPFGVSSSTVLAMSRAGKVRCSMDEKPSVQENSSNVGMGASLLAAACAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEEDEESGLSL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1630 132 Pfam Photosystem II reaction centre W protein (PsbW) 1 132 IPR009806 GO:0009507|GO:0009523|GO:0015979
Pvu1g1630 132 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 132 - -
Pvu1g1630 132 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 132 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1630 Pvu-Chr1 41516722 41517643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1630 K02721 - gmx:100306223 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1630 1 41516722 41517643 Pvu7g1822 7 41341279 41342256 PCT