Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1617 ATGCCTTTCACAATGAAGATTCAGCCAATTGATTCGCCCGTTCATGATGAGGCGCTTCGGCTTGAGCCTGTGAAGGCGGTGATCAAGTCGCGGCTGAAGCGGCTCCTGGAGCGCCAGTTCTCTGGCGTCCTCCGCAATTCGGCAGCGGAGAAGATCGTGGCAGGGGAGCTTCCGCGTTCCGGCAAAGACGGTTCCGCTGATTTCGAACCGAGCTCAGCGTGTCTGGCGAAGATGGTGCAGAGTTTCATGGAGGAGAATCCCGAGAAGCATTCCGCTGCCGGGAAATGCGCGCATAACCGCTACAACAGCTTCGAGGATAGCTCTGATGCAGAAACGAGTGCGTTTGGCAGTTTCGGCAACTCCAATTATTCTTCCTCTGGTGAAATGCACGAAATTCTCAAGGGTATGGTGGCATGTGCGAGTGTGTATGAGAGGAATTTGCTAGCGGACACTACAAAGATCATTGAGAAGAACAAGGCAACTTGCAAACGGAAGGACGATTGTTGCAGAAAGATCGTCACTGAAGGGTTGTTGGCTCTCGGATACGACGCTTCTGTATGCAAATCTCGCTGGGAAAAATCAACTTTCTGCCCCGCCGGGGAATATGAATACATTGATGTGATAATTGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATTGCTCGACCCACCAAGATATACAAAGCGATCCTCCATACCCTTCCTTACGTCTTCGTTGGCAAGTGTGACCGGTTGCAGAGCATCGTGGCCATCGCTTCGGAGGCTGCGAAGCTGAGTCTGAAGAAAAGGTGCATGCACGTTCCGCCGTGGAGAAAAGTGGAATACGTCAGAGCCAAATGGCTCTCCCCCTACACGTGCTTGCGTGGAGTCAAAGAGGAGACCGAAGAGAAAAATCAACTTGTGGAAGCGTTAGTGTTAACTGCCGCCGCTGCTGCATGCGAAACTTCCCGTGAAGATAATGAAAAATCAAAGTCAAAGTTGGTGGTTCAGAAGCCACTGGAGATGAAACCCAAGAGCTCACAGTCCGGTCTGGCAGCTGTGTTCCATGAAAAACCCTGA 1077 0.5144 MPFTMKIQPIDSPVHDEALRLEPVKAVIKSRLKRLLERQFSGVLRNSAAEKIVAGELPRSGKDGSADFEPSSACLAKMVQSFMEENPEKHSAAGKCAHNRYNSFEDSSDAETSAFGSFGNSNYSSSGEMHEILKGMVACASVYERNLLADTTKIIEKNKATCKRKDDCCRKIVTEGLLALGYDASVCKSRWEKSTFCPAGEYEYIDVIIGKERVVVDVDFRSEFEIARPTKIYKAILHTLPYVFVGKCDRLQSIVAIASEAAKLSLKKRCMHVPPWRKVEYVRAKWLSPYTCLRGVKEETEEKNQLVEALVLTAAAAACETSREDNEKSKSKLVVQKPLEMKPKSSQSGLAAVFHEKP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1617 358 Pfam PDDEXK-like family of unknown function 77 291 IPR006502 -
Pvu1g1617 358 MobiDBLite consensus disorder prediction 321 358 - -
Pvu1g1617 358 PANTHER OS03G0796600 PROTEIN 26 353 IPR006502 -
Pvu1g1617 358 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 26 353 - -
Pvu1g1617 358 MobiDBLite consensus disorder prediction 321 337 - -
Pvu1g1617 358 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 170 291 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1617 Pvu-Chr1 41347890 41350016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1617 - - gmx:100796711 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1617 1 41347890 41350016 Pvu1g1617 1 41347890 41350016 ECH
Pvu1g1617 1 41347890 41350016 Pvu7g1810 7 41171834 41174157 PCT