Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1614 ATGGTTGCAAATTGCTTTAGGTTGAACAGGAGTTCAGCACTATGTTCAACTCATTGGAATCCCATCAAACATAAACTAGAACATCCTTATATGGTTGCAATGCTCAGAACACCTTCAGATAGCATTACAGAAGAAACAAGAAAAGTTAATGCCTACAAAGATAACTTGTTTGATCGTTTAGCAATAAACCATCTTTCAAAAAGCGTTCAAGAAGCCACAGGACTTAGTAACAACAAGAGTGGGTATGAAAGCTTGGTTGAAGCAGCTACTGTGGCTAAACACAAATTTGACCCTATTCAGCAGCAAGAGGTTATCATCCAAGCTCTTAACAGAGCCTTCCCCAGGCCAATACTTTCTTTCATAAAGACAGTGCTGCCATCATCTAAACTCGCAAGGGAATATTTCGCCGTTTTCACAACTTTGTTCTTTGCCTGGTTAGTCGGACCTTGCGAGGTGAGAGAATCAAAAGTCAACGGCAGAAGTGAAAAAAATGTAGTCTACATCCCAAAATGCAGGTTTTTAGAGGAGACAAGTTGTGTAGGTATGTGTAATAATCTCTGCAAAATGCCATCTCAAACTTTTATAAAGGACTCTCTGGGGATGTCCGTCAACATGGTACCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGATCCTCCAGCATCAACTGATGATCCAGCACTGAACCAACCATGCTATAAACTATGCAAGGCATATAAAAATCATGGAACGAACTTCCTCAGTTAA 756 0.3995 MVANCFRLNRSSALCSTHWNPIKHKLEHPYMVAMLRTPSDSITEETRKVNAYKDNLFDRLAINHLSKSVQEATGLSNNKSGYESLVEAATVAKHKFDPIQQQEVIIQALNRAFPRPILSFIKTVLPSSKLAREYFAVFTTLFFAWLVGPCEVRESKVNGRSEKNVVYIPKCRFLEETSCVGMCNNLCKMPSQTFIKDSLGMSVNMVPNFDDMSCEMIFGQDPPASTDDPALNQPCYKLCKAYKNHGTNFLS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1614 251 Pfam Beta-carotene isomerase D27-like, C-terminal 145 225 IPR025114 GO:0005506
Pvu1g1614 251 PANTHER BETA-CAROTENE ISOMERASE D27 35 248 IPR038938 -
Pvu1g1614 251 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 35 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1614 Pvu-Chr1 41312236 41321672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1614 K17911 - gmx:100813404 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1614 1 41312236 41321672 Pvu7g1808 7 41134361 41143530 PCT