Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1608 ATGGGTTGGTTTTCAAAGATTTACACTGTTGTGATCTCTTTCCTTGGTTTCATTATTTGTCATGGCTGTGCTCTCTCGATCAGTTTATATGACGTTGAATGCGTCTCTGAACATGTTCTACATGATGGTGACACTGTTTCTGGGAATTTTGTAGTCATTGACTATGATATTTTTTGGAACTCCGACCATCCAGGAATCGATTTCAGTGTGACATCTCCAGGAGGGAGTTTGGTGTACTCTTTGAAAGGAACATCGGGGGACAAATTTCAATTCAAAGCAGCATTACATGGAATATATAAGTTTTGCTTTCAAAACCCTGCTTCAACACCAGAAACTGTGTCTTTCTACATTCATGTTGGTCACATTCCAAACGAACATGACTTAGCCAAAGATGAACATTTGGACCCCGTTAATGTGAAGATTGCTGAGTTGAGAGAAGCACTGGAGTCTATTATAATAGAACAGAAGTACTTGAAAGCACGTGATACTAGACATCGACACACAAACGAAAGCACCAGAAAACGTGTGGTCCTCTACACAATCTTGGAGTATGTCTTGTTTGCTGCAACAAGCATATCACAAGTGGTATACATTCGACGTCTCTTCAGCAAATCATTTGCTTACAACCGAGTATAG 636 0.3994 MGWFSKIYTVVISFLGFIICHGCALSISLYDVECVSEHVLHDGDTVSGNFVVIDYDIFWNSDHPGIDFSVTSPGGSLVYSLKGTSGDKFQFKAALHGIYKFCFQNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESIIIEQKYLKARDTRHRHTNESTRKRVVLYTILEYVLFAATSISQVVYIRRLFSKSFAYNRV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1608 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Pvu1g1608 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Pvu1g1608 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 207 IPR015720 -
Pvu1g1608 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 40 128 IPR036598 -
Pvu1g1608 211 Pfam emp24/gp25L/p24 family/GOLD 32 202 IPR009038 -
Pvu1g1608 211 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 4 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1608 Pvu-Chr1 41246244 41247518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1608 K20347 - gmx:100789501 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1608 1 41246244 41247518 Pvu1g1608 1 41246244 41247518 ECH