Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1599 ATGGCGGCTCTGTCCCATGCTGATTCTAGAAGAATGTATTCATGGTGGTGGGACAGTCACATTAGCCCCAAGAACTCGAAATGGCTCCAAGAGAATCTGACAGATATGGATTCCAAGGTGAAGCAAATGATCAAGGTTATTGAAGAAGATGCAGATTCCTTTGCTAGGAGGGCAGAAATGTATTATAAGAAACGGCCAGAGCTTATGAAATTAGTTGAAGAGTTTTATCGTGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATTCGTCAGGCCCATCGTACCATGGCTGAAGCATTTCCTAATCAAGTGCCTCCTGCAGCAGATGATTCATCCGGTGTTTCTTACTTGGAGACTGAGCCACATACACCAGAGACACTCGGCTTCTCCCGTTCATTTCTTGATTCAGATGAATTGCAAAAGAATGCTTCAACTCATTTCCATACCATCAAAAGAAATGGATCTTATACTGATGAAACTGATTGTGGTATAAGCAGAAAGGGTCTGAAACAGCTCAATGATCTATTTATGTCAGGAGATCCAGTAAGTGGGCGTGTTCGACGGGGGCTCAATTTTCTTGACGTAGAAGAGATTAATGGGCAAGACAATGGAAGCCAAGATAGTAGGACTGAAGTATTATCAGAGTCTGAACGGATAACCAAAGCTGAGACTGAAATTTTGGCCTTAAAGAAAGCCCTGTCTAACTTAGAAAGTGAAAAGGAGGCTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCTAATCTGGAATCAGAAATGTCTCGTGCAAGAGAGAATTCTCACGGACTTAATGAACGAGCAAACAAAGCTGAAGCTGAAGTTCAAACCTTGAAGGAAGCCATTGATGATTTACAGGCTGAAAGAGAAGTTAGTCTTCATCAGTACCAGCAATGCTTGGAGAAAATATATAATCTGGAGAAAAATATTTGCTCTGCTCAAAAGGATGTAGGAGAAGTCAATGAACGAGCTACTAGAGCTGAAATTAAAGCTGAATCCTTAAAGGAAGACCTTGCTAGAGTAGAAGCTCAAAAGGAAGCTGCCCTTGCTCAATATAACCAGTCCTTGGAGTTGTTGTCAAAAGTAGAGGAGAGGCTCGTACAAGCTGAAGAGAACGCAACAAGAATTAAAGAACAAGCTAATGATGCAAACACTGAAATTGAGAGCATGAAGTTAGAAATTGCTAAACTTACTGAAGAGAAGGAAGATGCAGCTCACTGTTATCAACAATGCTTAGAGATAATTTCCAGTTTGGAGCATAAACTCTCTTGTGCCCAAGAGGAGGTGCATAAGCTAAATTGCAAGATAAATGATGGGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTTTTCTCCTGGAAACATCTAATCAGACTTTGCAATCTGAATTGCAGTCTTTGGCACAGAAGTTGGGATTTCAGAGTGAAGAACTTAGTGAGAAGCAGAAAGAAATGGGTAGACTCTGGACTTGTATACAAGAGGAGAGACTGCGATTCATCGAGGCTGAAGCTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAAGAAGAACTAAAATCTCTTGCCACCGAGCTTCATGGTAAGGCTGAAATTCTGGAGAATATGGAATTCCATAAGCAGGCTTTAGAGGAAGAAGCACACAAGGCCAAAGAAGAAAACAAAACTCTAAATGAGCTCAAATTATCTTCATCTTTGTCTATAAAAAAAATGAAGGATGAGATATTAAATCTGAGGGAGATAATAAAGAAACTTGAACTGGAGGTTGGACTGCAGGTAGATGAAAGAAATGCTCTCCAGCAAGAAATTTACTATCTTAAAGAGGAGCTTAATGATGTGAATAAAAGACATGAATCCATGATGGAGGATGTCAGATCAACTGACTTAGATCCACAGTGCTTTGCTTTTTCTGTGAAGAACTTGCAAGATGAGAATTCAAAGCTGAAGGAAAGATGTGAAACCTACAAAGATGAGAAAGCAGCTCTAAAGGAAAAAGTGGAGATCTTGGAGAAGCTTTTGGAGAAGAATGCTGTTTTAGAGAGGTCTCTTTCAGATTTGACTGTTGAGCTCGAGAAGGCCAGAGGAAAGGTAAATGTATTGGAAGAAACTTGCGAATCTTTTCTTCGGGAGAAATCCACTCTCGCTGATGAAAAAGCGACCTTGTTTTCTCAGTTACAAACCACAGCTAAGCAGCTGGAGAAGCTCTCAGAGAAAAACAACCTTTTAGAAAGTTCACTATGTGATGTGAATGCTGAGCTTGAAGGATTAAGGATAAAGTCAAAGATCTTAGAAGACTCTTGTCTGTTGCTAGACCACGAGAGGTCCAGTATCAACTCTGAGAAAGAAACCTTAGTTTCACAATTCAACATCACTCATCAAACTCTGAAAGATCTTGAGAAACAACACAGTGAATTGGAACTGAAGCATTCTGAACTGAAAGCAGAAAGGGAATCTGCATTTCATAAGTTGGAAGAGCTACTTGTTTCCTTATATGCTGAGAGGGAAGAACATTCCAGAATTGTGCAATTGAATGAATGTCACTTGGCTGAGAAGGAATTGCAAATTTTTGTTCTCCAAGAAGATGCAGATTACCAGAAAAAGGAATATGAAGAGGAAATGGACAGATCTGTACATGCTCAAATGGACATTTTCATTTTGCAGAGAAGTATCCAGGATTTGGAGCAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTCTTGGAGGCTTCTAAACTGTCTGATAGATTGATATCTAAATTGGAGAATGACAACACTCAGAAGCAAGTTGATGTTAACTCATTGTCTGAGAAAATTAAAATACTCAGGATCGGACTGCTTCAGGTGTTGAAGACTCTTGATATTAACAGCGAGCCTTGGTGTGAAAATATGATTGAAATGGACCAGGAGCTTTTGAACCATATACATGGTAAACTTCAGGAGACACAAAGTTCTTTTGTCACAATTTTCAACGAAAGCCAGCAAGTGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGACCAGTTGAAATTAAAGGCTGAAAATCTTTTGACGGAAAGAAATTCCCTAGATAAGGAGTTGAGAACCCAGTCTACACAGTTTTTGGCATTGCAGGCAGAGGTACAAAAGATATTGGAGAAGAATCAGGAATTGAAGTCGACAATAAGGAAAGGAGAAGATAAAATGGAACTAATGGCTACTGAAGTAGAGAATTTATGCAAACAGCTGTTAGACTTGAAAGAGGATCTCCAAAACATAAAGGAAGAAAATTGCAAAACTTTTGAAGAGAAAAATTCCTTGATGGGAAGATTTCTGGACCTGGGTGAAGAGAAAAGTAAGTTGGAAGATGAAATCTGCATTATGATTGATGAGACAATAACACAATCTAATCTCTCGCTGGTCTACCAGAACATTGTATTCGAAAAACTCCTGGCACTTAAAGGGCTAAGCAACGATTTCGATAGACTTTGTTCAGTAAATACCGACCTTGAGGAGAAACTAAAAATACTCATGGGCAAAATAGAAGATGTGCAAATGGAAAATTCCGATCTTAAAGAGTCCTTTGCAGTGTCAAGCATCGAACTAAAATTAATTCAATCCGTCAATGATCAATTAAATTGTCAGATTAGGAATGGAAAGCAATTGTTGTCTCAAAAGGAAAATGAGATTTTGGAAGCAGCAGAGATGTTTAGCGCTTTACATGATAAGAAAACAGAATTGCAAAGATTGGTGGAGGTTCTGAAGAGCAAGTATGATGAAGCCAAGGTGATACTTGAAGACCAAGCTAGTCAAATTTTAAAATTGTCCTCCGAAAAGGATCAACAAAATAATGAGCTTGGATGCCTCGGTGAAGTGAATCAGAAGTTGGAGGAGGAAATGAGGCACCTGCACCAAGAAATTGGAGAAATTAAACTGAGGGAAGAGAAGCTAAGTCATGAACTACTTAAGGGAACAAATGAGATTAAACAATGGGAAACTCAGGCTGCCACACTCTATACCAGACTGCAAACTTCTGCCGTCAATGAGACATTATATGAAGAGAAGGTCCGTGAGCTAGCTGATGCATGTGAAGATCTTGAACGCAGAAGCAACTTTAAAGACATGGAAAGTGAAATGCTGAAAGAAAGAGTTTGCAAGTTGGAAGGTGACAACGGGAAGCTTCGGGTTCAGTTGGCTGCTTATGTCCCGGCTGCCAGTGCTTTGAATGACTGCATAACATCCTTGGAGATGCAAACACTTGGGCATGCAAAACCACATGATGACAAAGCATCAAAGGTTAAAGATTTCGCATATCACAAATACAATGAAGGTGGTCCACAAACAGGTGAAGATCAGAATGCTGCGGCAATAGATGCACTTCCAGATTTCCAAGGCATGCAGAAAAGAGTCAATGCAATTGAAACGGCTGTTAAACAGATGAATGAAAGTTTCAAAACTAAGGATGAAATGAGAGAGATTCAAGTGTTAAAATCTGGATTCAGCCGGCGCCAAGGAAATATTCAAGCAAGTAAGTATGTTACTGAAATGCATGAATCGAGGGGGCATCGAGGTGGAGCTTCTGATGAACTGAAGTCAAAAAGATCAGTGTCAGATGTCCCTGTAGCAGAAATTGAAGTTCTGCCAAAAGACATCATGCTTGATCAAACGTCTGAATGTTCATATGGGATAGGTAGGAGAGGAACTCTTGAGACTGATGATCAGATGCTCGAATTGTGGGAAACTGCTAATAAAGATGGCGTAATTGGGCTCACAGTTGGAAAGGCACAGAAGACAGCCATTGTGCCTACTGGATACCATCAAAAGAGAGCAACCAGGGAGCTCAGAAACAAATATCCGTCAGTAGAGTCCTTGATTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACAGTCACATTCACATGAAGAAGGCAACAGGAGGAAGATTTTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAACCTTGAAATTACCGTGCAAGATTTGATGAGCAGGGTAGAAATTACTGAGAGCACAAAGGGAAAAGGTATTGAGTTCGATACGGTGAAAGGGCAGCTTGAAGCTACTCAGGAAGCCATCACAAAGTTGTTTGATGCTAACAACAAGTTGAAGAAGAATGTAGAAGAGGGTACTTCATCCTTTGCAGGGAAGTATACAGCAGAATCAAATGAGAGTGGAAGTGGTAGCAGGAGAGTTTCAGAACAGGCTCGGAGAGGGTCTGAAAAGATAGGACGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTACTTCTAAAGTTGAATGATGAAAAAGAAGGCAAAGGAAAGGCAATGATAGATGAACGAAATTCAAAAGTTCTTCTGCGAGATTATCTCTATGATGGGACGAGAAGAAACTACCAGAAAAAGAAGAAGAAAGCACACTTTTGTGCATGCATGCAGCCTCCCACTAAGGGAGATTAA 5499 0.4015 MAALSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKVIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPAADDSSGVSYLETEPHTPETLGFSRSFLDSDELQKNASTHFHTIKRNGSYTDETDCGISRKGLKQLNDLFMSGDPVSGRVRRGLNFLDVEEINGQDNGSQDSRTEVLSESERITKAETEILALKKALSNLESEKEAGLLQYQQSLERLSNLESEMSRARENSHGLNERANKAEAEVQTLKEAIDDLQAEREVSLHQYQQCLEKIYNLEKNICSAQKDVGEVNERATRAEIKAESLKEDLARVEAQKEAALAQYNQSLELLSKVEERLVQAEENATRIKEQANDANTEIESMKLEIAKLTEEKEDAAHCYQQCLEIISSLEHKLSCAQEEVHKLNCKINDGVEKLHSSEQKCFLLETSNQTLQSELQSLAQKLGFQSEELSEKQKEMGRLWTCIQEERLRFIEAEAAFQTLQNLHSQSQEELKSLATELHGKAEILENMEFHKQALEEEAHKAKEENKTLNELKLSSSLSIKKMKDEILNLREIIKKLELEVGLQVDERNALQQEIYYLKEELNDVNKRHESMMEDVRSTDLDPQCFAFSVKNLQDENSKLKERCETYKDEKAALKEKVEILEKLLEKNAVLERSLSDLTVELEKARGKVNVLEETCESFLREKSTLADEKATLFSQLQTTAKQLEKLSEKNNLLESSLCDVNAELEGLRIKSKILEDSCLLLDHERSSINSEKETLVSQFNITHQTLKDLEKQHSELELKHSELKAERESAFHKLEELLVSLYAEREEHSRIVQLNECHLAEKELQIFVLQEDADYQKKEYEEEMDRSVHAQMDIFILQRSIQDLEQKNFSLLVECQRLLEASKLSDRLISKLENDNTQKQVDVNSLSEKIKILRIGLLQVLKTLDINSEPWCENMIEMDQELLNHIHGKLQETQSSFVTIFNESQQVAIENSVLVTFLDQLKLKAENLLTERNSLDKELRTQSTQFLALQAEVQKILEKNQELKSTIRKGEDKMELMATEVENLCKQLLDLKEDLQNIKEENCKTFEEKNSLMGRFLDLGEEKSKLEDEICIMIDETITQSNLSLVYQNIVFEKLLALKGLSNDFDRLCSVNTDLEEKLKILMGKIEDVQMENSDLKESFAVSSIELKLIQSVNDQLNCQIRNGKQLLSQKENEILEAAEMFSALHDKKTELQRLVEVLKSKYDEAKVILEDQASQILKLSSEKDQQNNELGCLGEVNQKLEEEMRHLHQEIGEIKLREEKLSHELLKGTNEIKQWETQAATLYTRLQTSAVNETLYEEKVRELADACEDLERRSNFKDMESEMLKERVCKLEGDNGKLRVQLAAYVPAASALNDCITSLEMQTLGHAKPHDDKASKVKDFAYHKYNEGGPQTGEDQNAAAIDALPDFQGMQKRVNAIETAVKQMNESFKTKDEMREIQVLKSGFSRRQGNIQASKYVTEMHESRGHRGGASDELKSKRSVSDVPVAEIEVLPKDIMLDQTSECSYGIGRRGTLETDDQMLELWETANKDGVIGLTVGKAQKTAIVPTGYHQKRATRELRNKYPSVESLIEKELSVDKLEISRRLTQSHSHEEGNRRKILERLDSDAQKLTNLEITVQDLMSRVEITESTKGKGIEFDTVKGQLEATQEAITKLFDANNKLKKNVEEGTSSFAGKYTAESNESGSGSRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDEKEGKGKAMIDERNSKVLLRDYLYDGTRRNYQKKKKKAHFCACMQPPTKGD* 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1599 1832 Coils Coil 902 922 - -
Pvu1g1599 1832 Coils Coil 737 757 - -
Pvu1g1599 1832 Coils Coil 426 446 - -
Pvu1g1599 1832 Coils Coil 223 243 - -
Pvu1g1599 1832 Coils Coil 1173 1200 - -
Pvu1g1599 1832 Coils Coil 1762 1782 - -
Pvu1g1599 1832 Coils Coil 580 639 - -
Pvu1g1599 1832 Coils Coil 545 575 - -
Pvu1g1599 1832 Coils Coil 807 827 - -
Pvu1g1599 1832 Coils Coil 1271 1319 - -
Pvu1g1599 1832 MobiDBLite consensus disorder prediction 1734 1752 - -
Pvu1g1599 1832 Coils Coil 1019 1102 - -
Pvu1g1599 1832 Coils Coil 1355 1375 - -
Pvu1g1599 1832 Coils Coil 1705 1725 - -
Pvu1g1599 1832 MobiDBLite consensus disorder prediction 106 125 - -
Pvu1g1599 1832 Gene3D - 217 394 - -
Pvu1g1599 1832 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1832 - -
Pvu1g1599 1832 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Pvu1g1599 1832 MobiDBLite consensus disorder prediction 1734 1758 - -
Pvu1g1599 1832 Coils Coil 251 306 - -
Pvu1g1599 1832 Coils Coil 328 418 - -
Pvu1g1599 1832 Coils Coil 930 950 - -
Pvu1g1599 1832 MobiDBLite consensus disorder prediction 1521 1540 - -
Pvu1g1599 1832 Coils Coil 468 495 - -
Pvu1g1599 1832 Coils Coil 517 537 - -
Pvu1g1599 1832 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Pvu1g1599 1832 PANTHER PROTEIN NETWORKED 4A 1 1832 - -
Pvu1g1599 1832 Coils Coil 650 722 - -
Pvu1g1599 1832 Coils Coil 1215 1235 - -
Pvu1g1599 1832 SUPERFAMILY Tropomyosin 232 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1599 Pvu-Chr1 41064833 41072243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1599 - - gmx:100810726 2946.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1599 1 41064833 41072243 Pvu1g1599 1 41064833 41072243 ECH
Pvu1g1599 1 41064833 41072243 Pvu7g1789 7 40800319 40808287 PCT