Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1598 CGTGCGAGCAGGAAGATGAATAGAGGGGGTACTCCTTTCTTCTTCTCTAACTTTCCCTTTGATCTCAAAGAAACAGATTTGTGGAAGATTTTTAGAAGATGGGGGAGGGTGAGCGATGTTTTTATATCTAGAAGATTGAACATCAAGAAGCAAAGAGAATTGGAGAACCAGTTGAACACAATATGGATTGGAAGTTGGAAACTATATGCTAATAGACCAAAATATAACAAGTCAGCAGAAACAAGAAAGGAATGGAATGAAAAGCTGAAAGAAAAGGAAATTGAGTTAGAGAAAGTGATTAAAAAAGAATGGAGGGTAAAAGGAACAAATTCCTACGCAAATGTGGTAAAAAATGGAGACAGAAACAAAGCAAAATCACTGAATAGGGCAAACATAAATGCTATACACTTTAAAGTGGAAGAAACACCAAGAGAATGGTTAAAACAATGCTATATTGGTAGGGTTTCGGATCTAAGCAAAGTATCAGGTTTGAATGAAAGCTTTATTTTGGGAGGCCTCAGTTACATAAAGGTTAAATTTATAGGCGGTTTTCATGTCTTATTCATGGGCGAAAATGAAACGAAGGTTAAAGAAGCTATAGAGGAAAACAAAGAATGGTTCGAAGATTTGTTTGACACCATTATCCCATGGGAAGATCAATTTGTAGTGATGGATAAATTGGTTTGGGTGAGATGTAGGGGACTACCGTTGAAACTATGGAATATTGAGTGCTTCAAACACATTTTTGCGTTACTAGGAACACTGGTTGAGGTAGATGAAGCAACAATGACATTGGACGAATTAGAATATGCAAGGTTTAAAGTTAGAGTATCAGTGAGTTGTGAGGCAAAGATAACTAGTTATATGAGAATCAATGAAGTCCTGTATCAGATATCAGTGGAGGAAGAATGCACAGTTCCTGAATACAACCTTTGTCAATGTCATGAGGGCGAAACATCTGACGGAGATGATTTTGAAGTAGATTCAATGGAGTCGCATGCATCAGGGCGTTCGGAGAATGGGACACAATTAGCGGATGCGAAAAGGAGGTGCAAATTAAAAAATCACTTTGAATCAGATTCTAATTCAAGCCCAATTAATGGAAGGATGGAGGATTCAGTCTGGATTGGGTCGCTGGGAAGCCCACTTAACATGGCAAGGATTAACGATCTGGAAGAGGTTGAACAGATTGGGAAACCTTGGAATGAAAACACCGTCGCACTCCGTGCTCACGGTCGACCCCAGAAAGACATTGCATTGGCACACCACGTTCAAAACGTAGCAGCCATCACACTCCAACCACACACAGTAGAGGAAACGAAGGAGAAAAAGAATCAACTACCGCACACCTTGAATTTGGCAGTGCAAAAGGAAAGGTTTTTATCCAACCATGCCCAGTCGTCGATGGGAGAAGAGACAGTGAGGGAGGCGGTTTCAATGCTGTCAATCTCGAAGGTGGAGGATTCTCTTTGTACGACGCCCTTGGGGGTGGAAGGGCGTTCTCCTTTTCACTATGCTCCAGCCTCCGCGGAGCAAAATCACACACAAAACCTTCTCCATTCAGGGTTGAGATCGTGCAGAATAAACGACAGATATCTACCGTTCAATGAGCAAAGTAAAAAAGAGTCTTATCGGGTATTGGATGGAACAGGAAAACAAAAGAAGGAAAGCAATGAATTGAGGTCCTTTAATTCTATCGACACAAATGAAAGAAGAGTTTTTTGGATGGGTGAATCAAGCAAAAATAGCAAACGGAAAGATCGCAAGCATATAAGGTCAGTCTTATCTCAAATTAGTAATTCTGTTTCTGACATGGCTATAAATAATTGCAATCGTTTATTTTGGCAAAAACGTGGAAGTTTAGAAACAATTAGATTATGGGAATTGGGTAAACAGTTAGGTGCTACATGTGGGGATGAAGGAAATATTATGTTAAGTTAG 1941 0.3993 RASRKMNRGGTPFFFSNFPFDLKETDLWKIFRRWGRVSDVFISRRLNIKKQRELENQLNTIWIGSWKLYANRPKYNKSAETRKEWNEKLKEKEIELEKVIKKEWRVKGTNSYANVVKNGDRNKAKSLNRANINAIHFKVEETPREWLKQCYIGRVSDLSKVSGLNESFILGGLSYIKVKFIGGFHVLFMGENETKVKEAIEENKEWFEDLFDTIIPWEDQFVVMDKLVWVRCRGLPLKLWNIECFKHIFALLGTLVEVDEATMTLDELEYARFKVRVSVSCEAKITSYMRINEVLYQISVEEECTVPEYNLCQCHEGETSDGDDFEVDSMESHASGRSENGTQLADAKRRCKLKNHFESDSNSSPINGRMEDSVWIGSLGSPLNMARINDLEEVEQIGKPWNENTVALRAHGRPQKDIALAHHVQNVAAITLQPHTVEETKEKKNQLPHTLNLAVQKERFLSNHAQSSMGEETVREAVSMLSISKVEDSLCTTPLGVEGRSPFHYAPASAEQNHTQNLLHSGLRSCRINDRYLPFNEQSKKESYRVLDGTGKQKKESNELRSFNSIDTNERRVFWMGESSKNSKRKDRKHIRSVLSQISNSVSDMAINNCNRLFWQKRGSLETIRLWELGKQLGATCGDEGNIMLS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1598 646 SUPERFAMILY RNA-binding domain, RBD 9 44 IPR035979 GO:0003676
Pvu1g1598 646 CDD RRM_SF 14 49 - -
Pvu1g1598 646 Pfam Domain of unknown function (DUF4283) 147 275 IPR025558 -
Pvu1g1598 646 MobiDBLite consensus disorder prediction 322 345 - -
Pvu1g1598 646 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 12 358 - -
Pvu1g1598 646 Coils Coil 75 102 - -
Pvu1g1598 646 PANTHER RNA RECOGNITION MOTIF 12 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1598 Pvu-Chr1 41051165 41053426 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1598 - - pvu:PHAVU_008G101400g 627.861