Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1597 ATGTCGTCGTTAATAGCAGATTTGCTCCGTCAAAGTGGCGGCACTGCCGTCATCGACGGCGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGCGCTAAGTGCCTCTTTTCCTCTCCACACCTCATACGCCAGGTGCACCTTGATTACCTGGAAAATGGCGCTGACATTATAATCACAGCATCTTATCAAGCCACCATTCAAGGTTTTAAAGCCAAAGGCTATACTGAAGAAGAGAGTGAAGCTATGCTCAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTACTATAAAGAATGCTCTTCGGGTGATGGGGCTGATGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTACAGTGGTGATTATGGTGATGCTATCACGAAGACAACTCTAAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGGCTTATGCTCAGCTTCTGGAAGAAGAAAACATACAAATTCCAGCATGGTTTGCTTTCAACTCGAAGGATGGAGTTAATGTTGTTAGCGGTGATTCTCTAGCGGAATGTGGCTCTATTGCTGAATCATGCAAAAATGTTGTTGCTGTTGGAATTAACTGTACCCCGCCCAGATTTATACATGATCTGATTGTTTTGCTCAAGAAGGTGACAACAAAACCAATTGTAATATATCCAAACAGTGGGGAAACTTATGATGCTGAACTAAAGGAGTGGGTGCAAAATACTGGTGAAACAGATGAAAATTTTATCTCATATGTTACTAAATGGCGTGAGCTAGGGGCCTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAGTGTACTGTCTAGCAAGGAATCTGCTATTCTTGGCAAAGAGTGA 1005 0.4488 MSSLIADLLRQSGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGYTEEESEAMLRRSVEIAREARELYYKECSSGDGADGKILKQRPILIAASVGSYGAYLADGSEYSGDYGDAITKTTLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAQLLEEENIQIPAWFAFNSKDGVNVVSGDSLAECGSIAESCKNVVAVGINCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDAELKEWVQNTGETDENFISYVTKWRELGASLVGGCCRTTPATIRKIYSVLSSKESAILGKE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1597 334 SUPERFAMILY Homocysteine S-methyltransferase 12 326 IPR036589 -
Pvu1g1597 334 PANTHER ZGC:172121 2 329 - -
Pvu1g1597 334 Gene3D - 5 321 IPR036589 -
Pvu1g1597 334 Pfam Homocysteine S-methyltransferase 17 321 IPR003726 -
Pvu1g1597 334 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 329 - -
Pvu1g1597 334 PIRSF BHMT 269 332 IPR017226 GO:0008168|GO:0008270|GO:0009086
Pvu1g1597 334 PIRSF BHMT 5 199 IPR017226 GO:0008168|GO:0008270|GO:0009086
Pvu1g1597 334 ProSiteProfiles Homocysteine-binding domain profile. 4 323 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1597 Pvu-Chr1 41034101 41039378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1597 K00547 - gmx:100790567 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1597 1 41034101 41039378 Pvu1g1597 1 41034101 41039378 ECH