Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1596 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGTAGCAACTACTCAGAGAGGGAGGCATGCACCATTAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAGTGCGTAGAGGTAAGAATGACCTTGATAAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCGCCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCACACCTCTCCACCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAAACAATGGTCCTGCAAGAAAATGGCTAGCCCTCATTAGAAGGACCTTGAACAACCTTCCTGGAACAAGTGGAGGATGCCACACACCTTCACCCCTCCCTGATCCCATTGTAGAGATAGATGCTGATTTTGAGGGATCAATAAGGCAGAAGGCAACCTCTTTCTTTCAACGAAGATCCTTCCAATCCTTGAGTCGTAGTTTGAGAATGGATAATGATATGTTAATGCAACAAGCTTGCCTCGATCGCCGTTTCAGTGTCTGTGATAGAGTGATATTTGGTCATCGAGCGAGTGACTATGACCCCAATTATCGATGGGGTTCCTCAGATGAAGAAAATGGCATTGGTGACTCCCCAATTACAGCACAATATTCACCGATGTCATATGGTGGTTGCTTCTCTGCAGAGGACAGTGACAGACAGGCAGGCCACTCAAGATACTGCTTGGTTGCTAGTAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCCGAGGGTTAATGGGATATCTCGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGATAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCAGTCCACGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGATCACGATCGAATAATTTGGCTGGGGGACTTAAATTACCGGATATCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAACGACCAGCTGTGTATAGAGCAGAGGCAAGGTCGAGTCTTTGAAGGATGGAACGAAGGGAAAATATATTTCCCTCCAACATATAAGTATTCAAACAATTCAGACCTATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAGACTGAGTCTATTACCTGCAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGAAGTAGAAGATTTGTTTCCACATTCACATGGTTATGGCTACACTGAGCACTACTTCTGA 1671 0.4267 MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRVRRGKNDLDKAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTENNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPDPIVEIDADFEGSIRQKATSFFQRRSFQSLSRSLRMDNDMLMQQACLDRRFSVCDRVIFGHRASDYDPNYRWGSSDEENGIGDSPITAQYSPMSYGGCFSAEDSDRQAGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDEIRRNSDVMEILRKTRFPPVHDMGDENSPQTILDHDRIIWLGDLNYRISLSYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDLYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAETESITCNQIKKSSSSRIEVEDLFPHSHGYGYTEHYF* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1596 556 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 551 IPR045849 GO:0004445|GO:0046855
Pvu1g1596 556 Gene3D Endonuclease/exonuclease/phosphatase 267 542 IPR036691 -
Pvu1g1596 556 Gene3D Endonuclease/exonuclease/phosphatase 71 179 IPR036691 -
Pvu1g1596 556 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 551 - -
Pvu1g1596 556 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
Pvu1g1596 556 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Pvu1g1596 556 SUPERFAMILY DNase I-like 83 528 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1596 Pvu-Chr1 41020353 41025110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1596 124 490 Acyl Lipid Metabolism Gene Families AT2G43900 26.263 2.28e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1596 - - gmx:100790043 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1596 1 41020353 41025110 Pvu1g1596 1 41020353 41025110 ECH
Pvu1g1596 1 41020353 41025110 Pvu7g1786 7 40735536 40740444 PCT