Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1595 ATGCTTGCAATAAGAAAGCTGAAAACAGGGCCTGATATCCCTTTGGTTTTAGGTGTCATGGTTGCTAATTGCAGTTATAGAATAGCCCGAGTTTCCAGTGACAAAAATGTCCGGTATACTGTTAAGTCGGTTGTCTCTAGTTTAGTTAAATCAAGTTCATCAGCATTTCCACCGGGATCAGAGAATAAATTTACTCTTCAAGGACTATATTTCTCTAGTGTGGCTGAAAGAATCTTGGTCCATGCTAAAGACCCTGCCAAAGTTAGTTTGGAGATACAAAATGCTATCGATTCGAATCAATTAGATTATTCATGGAAACTATTGGAGCAGCATATGCACATGGAGGGGTTTCCCAGAAAATCTGTCATCACTAAGCTTGTAACAAGTTATGTGGACAGCCTTGATACGAAATTGCTAGGAAAGGCTTATGAGTTGGTAGAACGTGCTATTGAGAAAGATAAACAAGATTTGTTGGAAAAGAATGTGCTTATCTACCTCAGCTTTGGCCTTGCAAAAGCCAGACTACCGGTTCCAGCATCAACCATTTTAAGGAAGATGATAGATATGGAGCATTTTCCCCCAGCCACTGCTTGGTCTGCAGTTTTAGCACACATGTCACAAACTGCAGAAGGAAGTTACCTTGCTGCTGAGTTGATTCTTGAAATAGGGTATTTGTTCCAGAACAATAGAGTAGATCCGCGTAAAAAGAGCAATGCACCTTTGATAGCCATGAAACCGAACAGTGCTGCTTTTAGCATTGCTTTGGCAGGGTGCCTCCTATTTGAGTCATCTAGGAAGGCAGAGCAGCTTCTTGATATGATGCCTCGAATTGGTGTCAAAGCAGATGCACACTTACTGATAATAATGGCACGTGTATACGAGAGAAATGGGCGAAGGGAAGAGCTCAAGAAGCTTCAAAGGCACATAGAGGAAGCCCCAAATCTAACTGATTTTCAGTTTCGACATTTCTATAATTGTTTGTTGACGTGCCATTTGAAATTTGGGGATCTAGATTCTGCTTCAAACATGGTTTTGGAAATGCTTAGGAAAGCAAAGGAAGCAAAAAATTCTCTTGCCGCTGCCAAATTTATGATGAATGCTGATGGAATTGATCCTAATCGTTCTCCTGGACTGGCTTCTGTCCGTAGTTTGAACAACAGTGAAGATTTAGATAGTTTACAAAATAACAGGTCGATTACAAGTGCTGTATTATCTTATGAGGAGTTCTCTACAGATAGAAACTTCTCAAAGCTTGAGGCAGAGTGGAAATCTATACTTGGTTCTTTATTGTCAAAGTTGCAGATGCGGGTGGACTTGATCACAACCAAACATGGTATATTGCAGCCAACTGAAACAATTTATGTAAAATTAGTTAAAGCTATGCTAGAAGCTGGCAAGACCAAGGATTTAGCTGTGTTTCTTCTCAAGGCAGAAAGAGAAGATTCTCCATTTTCCAATGACAATTCAGCTTTGGTTCATGTTATTAACACGTGCATCTCACTTGGATGGCTGGATCAAGCACACGATCTCCTGGATGAAATGCGTCTAGCCGGGGTTAGAACAGGTTCATCTGTATACTCCTCTCTTTTGAAAGCATATTGCCGAGCAAATAGGGCGGCAGATGTCACATCGCTTCTGAGAGATGCTAGGATAGCTGGTATCCAGCTTGACTCAAGCTCTTATGAGGCAATGATTCAATCCAGAGTGCTCCAGCAAGACACACAGGGTGCACTCCAACTATTTAAAGAGAGGAAAGAGGCTAGAATTCCAAGAGTTACCCAACAAAACTCTGGCATGCTGGCTAAAGATGGAGCGGAGACTGGGGAAGCTGGGCTAATGACCAAGCTGTTGCAGGAAATCAAGGAAGGGCAGGGAGTGGATTGTGGAGTTCATGACTGGAATAATGTAATCCACTTTTTTTGCAAGAAGAAACTGATGCAAGATGCAGAGAAGGCTCTAAAGAAGATGAGAAGCTTAGGCCACTTGCCAAATGTGCAAACTTTCCATTCTATGGTCACAGGGTATGCTGCCACTGGAGGAAAATATCAAGAGGTGACAGAGCTGTGGGGTGAGATGAAAGCTCATGCTTCTTCTGTCTCCATGACGTTTGATCAGGAACTTCTTGATTCTGTGTTGTATACGTTTGTAAGGGGTGGATTCTTCGCTCGAGCCAATGAAGTTGTGACCATGATGGAAAAAGGAAACATGTTTGTTGACAAGTACAAGTACCGAATGCTATTCTTGAAATACCATAAATCACTTTACAAAGGGAAGGCTCCGAAATTTCAGACAGAATCCCAACTAAGCAAAAGGGAAGCAGCCCTGGCTTTTAAAAGGTGGATAGGCTTGACTTGCTGA 2358 0.4198 MLAIRKLKTGPDIPLVLGVMVANCSYRIARVSSDKNVRYTVKSVVSSLVKSSSSAFPPGSENKFTLQGLYFSSVAERILVHAKDPAKVSLEIQNAIDSNQLDYSWKLLEQHMHMEGFPRKSVITKLVTSYVDSLDTKLLGKAYELVERAIEKDKQDLLEKNVLIYLSFGLAKARLPVPASTILRKMIDMEHFPPATAWSAVLAHMSQTAEGSYLAAELILEIGYLFQNNRVDPRKKSNAPLIAMKPNSAAFSIALAGCLLFESSRKAEQLLDMMPRIGVKADAHLLIIMARVYERNGRREELKKLQRHIEEAPNLTDFQFRHFYNCLLTCHLKFGDLDSASNMVLEMLRKAKEAKNSLAAAKFMMNADGIDPNRSPGLASVRSLNNSEDLDSLQNNRSITSAVLSYEEFSTDRNFSKLEAEWKSILGSLLSKLQMRVDLITTKHGILQPTETIYVKLVKAMLEAGKTKDLAVFLLKAEREDSPFSNDNSALVHVINTCISLGWLDQAHDLLDEMRLAGVRTGSSVYSSLLKAYCRANRAADVTSLLRDARIAGIQLDSSSYEAMIQSRVLQQDTQGALQLFKERKEARIPRVTQQNSGMLAKDGAETGEAGLMTKLLQEIKEGQGVDCGVHDWNNVIHFFCKKKLMQDAEKALKKMRSLGHLPNVQTFHSMVTGYAATGGKYQEVTELWGEMKAHASSVSMTFDQELLDSVLYTFVRGGFFARANEVVTMMEKGNMFVDKYKYRMLFLKYHKSLYKGKAPKFQTESQLSKREAALAFKRWIGLTC* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1595 785 Gene3D Tetratricopeptide repeat domain 384 586 IPR011990 GO:0005515
Pvu1g1595 785 Pfam PPR repeat family 631 676 IPR002885 -
Pvu1g1595 785 Pfam Pentatricopeptide repeat domain 544 589 IPR002885 -
Pvu1g1595 785 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 629 663 IPR002885 -
Pvu1g1595 785 TIGRFAM PPR: pentatricopeptide repeat domain 633 665 IPR002885 -
Pvu1g1595 785 PANTHER OS10G0422566 PROTEIN 16 783 - -
Pvu1g1595 785 Gene3D Tetratricopeptide repeat domain 598 781 IPR011990 GO:0005515
Pvu1g1595 785 Gene3D Tetratricopeptide repeat domain 169 375 IPR011990 GO:0005515
Pvu1g1595 785 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 664 699 IPR002885 -
Pvu1g1595 785 PANTHER BNAC05G43320D PROTEIN 16 783 - -
Pvu1g1595 785 Pfam PPR repeat 324 350 IPR002885 -
Pvu1g1595 785 Pfam PPR repeat 494 519 IPR002885 -
Pvu1g1595 785 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 522 556 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1595 Pvu-Chr1 41015270 41019057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1595 447 760 Glycosyltransferase AT1G05670 23.270 1.45e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1595 - - gmx:102661989 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1595 1 41015270 41019057 Pvu1g1595 1 41015270 41019057 ECH