Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1592 ATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCACGGGTTCCTTTCTACCTTCACCCAGTGTTAGAGCTTGTCTCTCGATCTTGGAAAGCAGCTATTCGAAGCTCTGAACTATTTAGAGCTCGGCAGGAGGTTGGTTCAACTGAGGATCTGCTATGTGTATGTGCTTTTGATCCAGAGAATTTATGGCAGTTGTATGACCCCTTGCGAGATCTCTGGATTACACTTCCTGTTCTTCCATCAAAGATCAAGCACCTTTCCCACTTTGGTGCAGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCTTTGACTGGGGACCAAGATGGTTGTTTCGCAACAGATGAAGTCTGGTCATATGACCCTGTAGTCCGACAGTGGGCCCCTCGTGCACCAATGCTTGTCCCACGTTCTATGTTTGCATGCTGTGCTTTGGATGGGAAAATTGTCGTAGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGAGAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCAGCCTGTTCAGGAGTAGTCATCAGCGGAAAGGTGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCGGGGCCTGGGTGGATTGTTGAGGAATGTGCATGGCTCCAAGGTCCGATGGCAGTTGTCCGTGATTCACTCTATGTGATGAGCCATGGACTAATCCTTAAACAGGACAAAGAACTGAGGAAGGTTGTAGGTTCAGCATCTGAGTTTCGAAAGAGAATTGGATTTGCAATGGCTGGACTAGGTGATGAGTTATACGTGATTGGAGGCTTCATTGGCCCTGATAGATGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAACGATAGACCAACTTGGCGCCAAGCAGCTCCAATGACTTGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4634 MSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWKAAIRSSELFRARQEVGSTEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIKHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRAPMLVPRSMFACCALDGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMPDLHRTHNSACSGVVISGKVHVLHKDMSTVQVLDNAGPGWIVEECAWLQGPMAVVRDSLYVMSHGLILKQDKELRKVVGSASEFRKRIGFAMAGLGDELYVIGGFIGPDRWNWDIKPLSEVDVLTLGNDRPTWRQAAPMTWCHGTILGCTLLRI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1592 345 SUPERFAMILY Kelch motif 61 331 IPR015915 GO:0005515
Pvu1g1592 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 345 - -
Pvu1g1592 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Pvu1g1592 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Pvu1g1592 345 SMART kelc_smart 161 209 IPR006652 GO:0005515
Pvu1g1592 345 Gene3D - 60 341 IPR015915 GO:0005515
Pvu1g1592 345 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 345 - -
Pvu1g1592 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Pvu1g1592 345 Pfam Kelch motif 278 330 IPR006652 GO:0005515
Pvu1g1592 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Pvu1g1592 345 SMART fbox_2 8 48 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1592 Pvu-Chr1 40976531 40977886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1592 8 188 Miscellaneous Gene Families AT4G33900 30.000 1.29e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1592 - - gmx:100800954 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1592 1 40976531 40977886 Pvu1g1592 1 40976531 40977886 ECH