Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1590 ATGCTGCTGAGGAACAGATCAAGAGCGGTGAGCAAGCCAGGTTTGATGGCTGATCATAGCTCTCAGCAATCCCCCACTCAAAACTATGCTAAAACTATACCCTCTCTATTTGGGTCACCCAAATTTAGAGATTTCACCAACAAGTGTCTCTCCTCAGGAACCGAGGCCTTAAGGAGCCCAACTTCAATTCTTGATGCCAGAGCATTATCCCCTTCTGCCTTTGGGAATCCATTCTTAACTCTTCCATACAAAATCTCCCCACCAAGCAGAACTTCCTGGGACAAGCCTGATTCAAAGGGCCTTCGTCTTGCTCTTGTTGATGCTCTCAAAGATGATGACAACCCAATTCATGACAATTCTGAGCCCAACAAAGGAAACGTTCTGCTTAGAGTGAAAATCCCATTTGAGTCTCAGACATGTGCTGATGATTTTGGAACCAAAACCAAGGATTCAAAAAACTCATCAGGGTCAGAAATTTCTGCAAAGGATGATTGTGTTTCGCCAAGTGTGAGGGCTCTGTCTTGGAGTGAGATGGAGCTTTCTGAGGAATATACATGCGTGATATCCCATGGACCTAACCCAAAAACCACACACATATTCAATAATTGCATTGTGGTGGAGACCTATTATTCTCTCCCCCAAAACCAAAACTCTCATTCTGCTACCTCCGCAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAACATCTTGACCAGACCAAGGACATCTTTATTTATAGAGGAGAGAAAGCTTTCTGTAGCAGGAAGTGCCGCCACCAAGAAATGGTGCTGGATGGAATAGAAAATTCAGAGTTTGAAAGCAACGGTTTTTCTTGA 837 0.4385 MLLRNRSRAVSKPGLMADHSSQQSPTQNYAKTIPSLFGSPKFRDFTNKCLSSGTEALRSPTSILDARALSPSAFGNPFLTLPYKISPPSRTSWDKPDSKGLRLALVDALKDDDNPIHDNSEPNKGNVLLRVKIPFESQTCADDFGTKTKDSKNSSGSEISAKDDCVSPSVRALSWSEMELSEEYTCVISHGPNPKTTHIFNNCIVVETYYSLPQNQNSHSATSANFLSFCHTCKKHLDQTKDIFIYRGEKAFCSRKCRHQEMVLDGIENSEFESNGFS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1590 278 MobiDBLite consensus disorder prediction 1 27 - -
Pvu1g1590 278 ProSiteProfiles Zinc finger FLZ-type profile. 225 269 IPR007650 -
Pvu1g1590 278 Pfam zinc-finger of the FCS-type, C2-C2 217 265 IPR007650 -
Pvu1g1590 278 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 269 - -
Pvu1g1590 278 PANTHER FCS-LIKE ZINC FINGER 8 2 269 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1590 Pvu-Chr1 40946724 40948989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1590 - - gmx:100788456 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1590 1 40946724 40948989 Pvu1g1590 1 40946724 40948989 ECH
Pvu1g1590 1 40946724 40948989 Pvu7g1783 7 40680858 40682605 PCT