Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1585 ATGGCTGATACTTCGTTTTTCTTCACTAATATTCCGCCTGGTCATGAAGAAAAGGAGCTTTGGAATATTTTCCAAAGATGGGGTAGAGTACTAGATGTTTTCATACCCAAAAAACTTAATTCTAGAAAACAACACTTCGGGTTTGTAAGGTTCCATGGGGTGAGGGACGTTTGCGAGTTAAAAAGAAGGTTGGATGCTATTTGGATTGGGTTATGGAAATTACGTGTGAACATAGCCAGATACCGTAAGAAAGAACAACCAAAGGAAGTGCGTAATCAGAACCGGAGGGTGGAGGGATCTAAAAAAATTTGGAGCCAGAAGGAGATGCACCGTTCATTCGCAGAAGTGGTTAGGAGTGGGAGTGCGAGTTCTTCTCAGGGAAAAAAGAGTGATGGTGAACAGAAGGAGTTCGAAGTTGTTATACCTTGTTTTAAGGTTGAGGTGGAGCCATCATTGTGGCTCGAGAGTTGTTTTATTGGGAGGTTCTCGGAACTGTCCAATTTTCAGGCGGTTAAGGAGAGTGTTGTGGTGGGTGGTTATGGTTCGTTAAATCTTAGTTATCTTGGGGAGAATTTTATGTTGTTGGTTGGTGATGGTGAGACTTCTGTTGTGAAGGTCATTGATGGTAACAAAGAGTGGTTTGGGGATATCTTTGATTCTCTTGTCCCTTGGGATAATTCTTTCTCTGTCACTGGTAAAGTTGCTTGGGTTCGAGTTAGGGGTCTACCATTGATGTTTTGGAATAGACAATGCTTTGAACTTATTGGGGCGTTAGTAGGAAGTTTATCGAGGTGGATGAGGCAACTGAGGCACGAGAGACCCTTGAGTTTGCTAGATTACGGATCAAGATTCCAGCGGGCGGGAGTGCAAATGTGTAAGTGCATGGAATGGGGGCAGTTGTCTGAGGGGAGTTCTGAGGCACGCTATTTAGTCACTAATGATGAAGGTGTGATTGAGTCCGTGTTCTCGGACATTGGAGGAGAAGGTGATGGAGTTAAGGGCAACTTAGATTTATTAGAAGATCCAGAGTTGGTAGAATATTTTTCTAAAGTTGGTGTAGACCTAAAAAAGGGGGAAGTGCCTGTATTGGGAAGCCAAAACAATGAGTGGGAAAGGTTGGGAAGCCAAAACCGTGCATGGGAAAGAATGGAAGTGGGCGGTGCACTTAATGGGATCCAAAACCACGTGTCAGGTGGTGTAAATGAGGGTAGTTCTAGAAAAGAGGGGGGGTGGTCTGATGAGTTTATTTGTGTTGGGCCTACATTGGCCCAAGTACACTTGGTTGGTTTCCCTGCAACTTGCGACTTTGGGGTGGACGGAGACGTAAGTCCAAGCGGTGTTGCCCTAGGTGGTATGACAACCAGCAACGACGCGGTGTTGGTTTCTCTTGCTCCGACAACGACGGATGCTCTGCCTACGAAGGGGTGTTCGAGCAAAGTAGAAATCAAGGTTAACGACGACATTGTTTTAGTTACGTCAACGACAACAGTGACGACGCCAATTGGGCACCATCTGGGTGCGTCGCCGTGTGACGAGGTGGCAGCGGAGCCCGTTTACAAAGACGAAGGGCTCGAGTCAATGGGTGGCTCGGCTGAAGTGGCGGATGGAGGAGAATTAGACGGCGTTAATAGGAGTGTCGGGAAGGGGTCAGTAGGGGCGGTTGAGATGGTGTTTTCGGCGAAGGCAGCAGGTGGAAAAAGACTTGGCAAGACATTATCTTCCTCTAAAACCAACGTTAAGAATATGGGGAAGAAAGTCGCTCCGTCTTCGTTGGTGGGTAAAAGGTTAGAAATTATTGTCTCATCTATTTCTGACAATGATGTAAGGAACTGTAATAATCGTTATTGGCTGGAAAATAAGGAATCGGAAGCCCAAAAAATTTGGAACATTGGAAAAGATCTGGGATTTTCGTTTGCTGGGAAGGAAGAAGTGGTAGTAAAAAATCTGCAAGCATTGGAAGCTCGGAACAGAGATAACATGTTGCTCAAAAGGAAGGAGAGTGTAGTGTCTGATGATGAAAATAATTAG 2028 0.4541 MADTSFFFTNIPPGHEEKELWNIFQRWGRVLDVFIPKKLNSRKQHFGFVRFHGVRDVCELKRRLDAIWIGLWKLRVNIARYRKKEQPKEVRNQNRRVEGSKKIWSQKEMHRSFAEVVRSGSASSSQGKKSDGEQKEFEVVIPCFKVEVEPSLWLESCFIGRFSELSNFQAVKESVVVGGYGSLNLSYLGENFMLLVGDGETSVVKVIDGNKEWFGDIFDSLVPWDNSFSVTGKVAWVRVRGLPLMFWNRQCFELIGALVGSLSRWMRQLRHERPLSLLDYGSRFQRAGVQMCKCMEWGQLSEGSSEARYLVTNDEGVIESVFSDIGGEGDGVKGNLDLLEDPELVEYFSKVGVDLKKGEVPVLGSQNNEWERLGSQNRAWERMEVGGALNGIQNHVSGGVNEGSSRKEGGWSDEFICVGPTLAQVHLVGFPATCDFGVDGDVSPSGVALGGMTTSNDAVLVSLAPTTTDALPTKGCSSKVEIKVNDDIVLVTSTTTVTTPIGHHLGASPCDEVAAEPVYKDEGLESMGGSAEVADGGELDGVNRSVGKGSVGAVEMVFSAKAAGGKRLGKTLSSSKTNVKNMGKKVAPSSLVGKRLEIIVSSISDNDVRNCNNRYWLENKESEAQKIWNIGKDLGFSFAGKEEVVVKNLQALEARNRDNMLLKRKESVVSDDENN* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1585 675 Gene3D - 2 112 IPR012677 -
Pvu1g1585 675 PANTHER RNA RECOGNITION MOTIF 5 260 - -
Pvu1g1585 675 CDD RRM_SF 7 77 - -
Pvu1g1585 675 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 5 260 - -
Pvu1g1585 675 Pfam Domain of unknown function (DUF4283) 154 261 IPR025558 -
Pvu1g1585 675 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 81 IPR000504 GO:0003723
Pvu1g1585 675 SUPERFAMILY RNA-binding domain, RBD 5 91 IPR035979 GO:0003676
Pvu1g1585 675 SMART rrm1_1 5 77 IPR000504 GO:0003723
Pvu1g1585 675 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 68 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1585 Pvu-Chr1 40863481 40865684 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1585 - K12891 pvu:PHAVU_001G152700g 1332.39