Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1582 ATGGATTCCGTTGTCCTTCACAGTGTGAGTGCGTCATCAGCGTCATCGTCAATGGCGAAGCGTCCGTGTCCGTCGCAAAACCCTAGAGTGGAGAAGCTGAGCGATGTAGAGCGTCTTCTAGACGCGTTTCTTTCCCTCTCCGACCTCCCTTCTCTCTCCCTCGATCTCTCCTTCGAGAGGCTTCTACAATCGGCCCCCTCCGACTCCGATCTTATCGATCGCGCCCTCAAAATGGGTTCTCTCCTCCTTGACGCCGCCAAGCACTCTTCTCGGAAACGCGCTTCCAACCACAATTCCCTTGCCTGGCCCCTCCCTCCCGACCTCACCATCAAGGTGTTCTCAATGCTAGATACCCAGAGCCTGTGCTATGCATCAGCTACTTGTTCAATGTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATGCAAATCTTGATTTGACAACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGTGTTGTTCCTGGCGCTACTACTTCACTTGGATCTTGTCCACCATTTGTTTGTACCATCAGAAATGCTATTGTAGAAGTATCAAATTTTTCATGGAATGATAAGAGATCTCGACAGGGGAGGGAGTCATCCATTCTCACAAGATGCTGTTTAAGCCCTTTAAGCGGTGATGGTGGCACCCCAGGGGCTCTTTTAAGAAAGTTGCACTTGTATAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCAGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGACAAACACTAATGTCAGTAAGTGCAAACTGCCACTTGATAGAGCGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAACTACATGATTGCAAAGTTCGCGTATTGGTCAAGGGATTTAGGAAACTGAAATATTGTGACTTTTCAACATCCTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGGGGAAATTTACTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCGAGGCTGTTGACTGCAATTCTTGCTGGAGATTTCAAATTTCTTGTACATCTTGACATATCAAATAGGGAAGGTTTAGCATCTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAACGAGGCCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTATATGGAGACATTTGATGCTGATATGAACAGTGAGATAAGTCTGCCCTCACAATTGAGTAGCCACACGTCAGATGGATCAGTTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAAGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTACGTGATATACGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1578 0.4461 MDSVVLHSVSASSASSSMAKRPCPSQNPRVEKLSDVERLLDAFLSLSDLPSLSLDLSFERLLQSAPSDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSMFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGTPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYCDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLETRPDMCLVAEYPSAEGSYMETFDADMNSEISLPSQLSSHTSDGSVFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1582 525 Gene3D Ribonuclease Inhibitor 98 429 IPR032675 -
Pvu1g1582 525 PANTHER F-BOX SKIP17-LIKE PROTEIN 35 468 - -
Pvu1g1582 525 SUPERFAMILY RNI-like 237 419 - -
Pvu1g1582 525 MobiDBLite consensus disorder prediction 473 506 - -
Pvu1g1582 525 Pfam F-box-like 104 146 IPR001810 GO:0005515
Pvu1g1582 525 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 35 468 - -
Pvu1g1582 525 SUPERFAMILY F-box domain 91 149 IPR036047 GO:0005515
Pvu1g1582 525 MobiDBLite consensus disorder prediction 473 505 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1582 K10268 - gmx:100786317 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1582 1 40834077 40842208 Pvu1g1582 1 40834077 40842208 ECH