Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1579 ATGGCTTCTCCCTTCTCCATCCACTGCCACCTTTCCTCTTTCTCTTATTCTGACCATTTTCATCTTCCATCATCTTCTTATCCTTCTTCTTCTTCTTCTTCTTCTATTTTTCTTCACTTCTCCAAATTCTCTCTTGGTTCTGTGTCCTCTAATACTAACGAAAAACAAGAGATAAGATGCAGAGCTATATCCAAACCACGAACGCAAGAATATTCAGACATATTTCAAGGTAGTCTTGCAATGTTAAAGATGCGCGAGATTAATGTGGAGGATGACATAGAAGAGGAGCAAGACACTGGGGTTTTGGTGGCAAAAGACATCAAGAAACGAGTGGACAGTATCAAATCAATATTGGGTTCATTGGAAGATGGAGAGATAACTGTGTCTGCTTATGACACTGCTTGGGTTGCTCTGATAGAAGATATCCATGGAAGTGGCACTCCTCAATTTCCGGCGAGTCTAGAATGGATAGCAAAAAATCAACTTCAGGATGGATCATGGGGAGATAATGAGTTGTTTTCAGCACATGATCGGATCTTAAACACGTTGGCTTGTGTTATTGCATTAAAATCATGGAATATACATCCTGAAAAGTGTGAGAAAGGAATGACATTTTTTAACGAGAATCTTAGCAAGCTTGAGAATGAGAATGTGGAGCATATGCCAATTGGGTTTGAAGTAGCTTTCCCATCACTTCTTGACATGGCTCGTGGGTTGAACATCGAAGTGCCAGACAATTCTCCTATCCTGAACAAAATCTTTGCAATGAGAAACGTAAAACTCACAAGAATACCAAGAGAGATGATGCATAAAGTGCCCACAAGTCTGCTTCATAGCTTGGAAGGGATGTCAGACTTGGACTGGAAATCACTTCTGAAACTGCAATCTCAAGACGGGTCTTTCTTGTTTTCTCCGTCCTCCACCGCTTTTGCTCTCATGCAAACCAAAGATCAAAATTGCTACAATTACTTGAATCAAATGGTCAAGAAGTTCAATGGGGGAGTTCCAAACGTGTATCCAGTGGATTTGTTTGAACATATTTGGGTGGTTGATAGGCTGGAACGCCTAGGAATATCTCGGTATTTTCAGCAAGAGATCAAAGACTGTATGAGCTATGTTCATAGATATTGGACCGAAAAGGGTATTTGTTGGGCAAGAAATTCAGAAGTTCAAGACATTGATGACACTGCAATGGGGTTCAGATTACTGAGATTACATGGCCACCATGTTTCAGCCGATGTGTTCAAGCACTTTGAGAGGAACGGTGAGTTTTTCTGTTTTAGCGGGCAATCGACACAAGCTGTGACAGGAATGTTCAATCTGTTAAGGGCATGTCAAGTAATGTTCCCGGGAGAGAAGATTCTAGAAGATGGGAAGAAGTTTTCTGCAAAATTTTTGAGTGCGAAGAGAGAAGCAAATGAGCTAGTAGATAAATGGATCATAATGAAAAACTTAGCAGAAGAGGTGACATACGCATTGGACGGGCCATGGTACGCAAGTTTGCCTCGAGTGGAGACAAGATTTTACATTGATCAATATGGGGGTGAGGGTGACGTCTGGATAGGCAAGACCCTTTATAGGATGCCCTATGTGAACAACAACAAGTATCTGGAGCTTGCTAAATTAGATTACAACAATTGTCAGGCACTGCATCTAATAGAGTGGGGGAAAATGCAGAAGTGGTACTCAGAATCTAGATTGGTAGAGTTTGGAATGAACAGAAGAACTCTTCTGTTGGCTTATTTTCTAGCAACAGCGAGCATATTTGAGCCTGAAAAGTCACATGTGAGGCTTGCTTGGGCCAAAACCATGGTCTTACTTGAGACCATAACATCCTATGTTACGGATGCAGAAATGAAGAAAACTTTCATGAAAAAATTCAGTGACTGCATTAGCAGGCCAGACTACTCCATTGGCTGGAGGCTGAACAGGAACAGAACAGGACATGGACTCGTTGAAACTTTGGTTGCCACCATAGATCAAATATCCTGGGATATAATTGTTTCTCATGGTCATGAAATCGGATATGATATGCATCGCAGTTGGGAAAAGTGGCTTTCAAGTTGGCACAACGAAGGAGACAAATGTGAAGGACAAGGAGAGCTTTTGGCGCAGATAATAAACCTGTGTGGCGGGCATTGGATTTCAGAGGATCAAATGTTCAATCCTCAATATGAGACTCTCCTTCAACTCACTAACACACTCTGTCATACACTCCATTGTCATCAAAAGGACAAGGAATTCGAGAGCACTATCTCCCCAGAAGTTGAGTCAAAAATGCAAGAACTGGTGCAATTGGTGTTCCAAGAATCTCCATCTGGCATTGACTTCAATATCAAGAACACTTTCCTTACCGTGGCCAAGAGTTATTATTACGCAGCTTTCTGTGATTCAAGGACCACCAACTTCCACATTGCCAAAGTTCTGTTTGATAAAGTTATTTAG 2445 0.4143 MASPFSIHCHLSSFSYSDHFHLPSSSYPSSSSSSSIFLHFSKFSLGSVSSNTNEKQEIRCRAISKPRTQEYSDIFQGSLAMLKMREINVEDDIEEEQDTGVLVAKDIKKRVDSIKSILGSLEDGEITVSAYDTAWVALIEDIHGSGTPQFPASLEWIAKNQLQDGSWGDNELFSAHDRILNTLACVIALKSWNIHPEKCEKGMTFFNENLSKLENENVEHMPIGFEVAFPSLLDMARGLNIEVPDNSPILNKIFAMRNVKLTRIPREMMHKVPTSLLHSLEGMSDLDWKSLLKLQSQDGSFLFSPSSTAFALMQTKDQNCYNYLNQMVKKFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCMSYVHRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHHVSADVFKHFERNGEFFCFSGQSTQAVTGMFNLLRACQVMFPGEKILEDGKKFSAKFLSAKREANELVDKWIIMKNLAEEVTYALDGPWYASLPRVETRFYIDQYGGEGDVWIGKTLYRMPYVNNNKYLELAKLDYNNCQALHLIEWGKMQKWYSESRLVEFGMNRRTLLLAYFLATASIFEPEKSHVRLAWAKTMVLLETITSYVTDAEMKKTFMKKFSDCISRPDYSIGWRLNRNRTGHGLVETLVATIDQISWDIIVSHGHEIGYDMHRSWEKWLSSWHNEGDKCEGQGELLAQIINLCGGHWISEDQMFNPQYETLLQLTNTLCHTLHCHQKDKEFESTISPEVESKMQELVQLVFQESPSGIDFNIKNTFLTVAKSYYYAAFCDSRTTNFHIAKVLFDKVI* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1579 814 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 103 527 - -
Pvu1g1579 814 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 91 810 - -
Pvu1g1579 814 SUPERFAMILY Terpenoid synthases 532 795 IPR008949 -
Pvu1g1579 814 Pfam Terpene synthase, N-terminal domain 287 493 IPR001906 GO:0010333|GO:0016829
Pvu1g1579 814 Gene3D - 130 342 - -
Pvu1g1579 814 Pfam Terpene synthase family, metal binding domain 537 696 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu1g1579 814 Gene3D - 113 545 IPR036965 GO:0010333|GO:0016829
Pvu1g1579 814 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 298 518 IPR008930 -
Pvu1g1579 814 Gene3D Farnesyl Diphosphate Synthase 547 814 IPR008949 -
Pvu1g1579 814 SFLD Terpene Cyclase Like 1 N-term 103 527 - -
Pvu1g1579 814 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 91 810 - -
Pvu1g1579 814 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 130 313 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1579 Pvu-Chr1 40757206 40764770 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1579 K04120 - gmx:100784193 1425.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1579 1 40757206 40764770 Pvu1g1579 1 40757206 40764770 ECH