Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1577 ATGGCTTCTCAATTTGCCTTCACTCTCAGTCACAGGCTTCCTTCATCATGTGCCACACCTGCAGCTAAATCTTTTAACTCTGTTTGTTCTTACATTCGATCATCATACGGTATTTTCAGGGGTACTCGTCCTCCCCTCCTATTCACAGAAAGCAAACATACCAAGACTAGTGGAGTTCAACCAATATGCTCTCGGACTCTAGAAATTGTTGCTGAAGTGTCTCAGGACAATATCTTGAAGGATGGTAATATAGACAAGGAAGGTCTTAATCTGGAGATACAGAAGAAAATAAATGTGGTAAAATTAATATTGGATTCAAAGGAAGATGGAGCAATTACAATATCAGCATATGACACTGCATGGGTTGCTCTAGTGAAAAATGTTGAGGACACCAATTCTCCTCAGTTCCCTTCCTGTATTGAATGGATTGCAAATAACCAGCTGCACGACGGTTCCTGGGGAGACGCTGAACTATTCATTGCCCATGATCGTATTCTTAACACGTTAGCTTGTGTGCTTGCATTAAGATCATGGAACATGCACCCTCAAAAGTGTGAGAAAGGAATGAAGTTTTTTAAAGAGAATCTGTACAAGCTTCAGGATGAAAATCCCGAACATATGCCAATCGGGTTCGAAATTACTTTCCCTTCTCTTCTGGATTTAGCTAGAAGTTTGGATGTTGAAGTGCCAGATGAGTCTCCTATCTTGAAAAACATCATTGCGATGAGAGACGTGAAGCTTAAGAAAATACCAAGAGAGATTCTGCACAAAGAGCCTACAACACTGCTCCATAGTTTGGAGGGAATGCAAAATTTAGACTGGAAACAGCTACTGAAGTTGCAGTGCCAAGACGGGTCATTCTTATTCTCTCCATCCTCCACAGCTTATGCTCTCATACAAACTAAGGATGAAAGTGCTCACAAATACCTGGATAAAACACTCCAGAAGTTCAATGGGGGAGTTCCTAATGTCTACCCGGTGGATTTGTTTGAACGCACATGGATCTTCGATAGACTTGATCGTCTTGGAATTTCAAGATATTTTCAGTCAGAGATCAAAGACTGCGTCGCATATGTTTCAAGATATTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAGAGGTTCAAGATATAGATGACACAGCAATGGGATTCAGACTTCTAAGGTTGCATGGGCACCAAGTTTCAGCCAGTGTGTTTAAGAACTTTGAGAAAAATGGGGAATTTTTCTGCTTTTCTGGGCAGTCAAACCAAGCTGTTACAGGAATGTTCAATCTCTATCGAGCATCTCAAGTGCTATTTCAAGGAGAGAAGATTCTTGAGGATGCCAAGAACTTCTCAGCCAAATTTTTAAGTGAGAAACGTGAAGCAAATGAGCTCCTAGATAAATGGATCATAACAAAAGATTTACCTGGCGAGGTGGGTTATGCTTTGGACATGCCCTGGTATGCTAGCTTGCCAAGAGTGGAGACAAGATTTTACCTTGAACAATATGGAGGTAGCAGTGACGTTTGGATTGGCAAGACCCTTTATAGGATGCCCTTCGTGAACAATGATGTCTATCTCGAGCTTGCAAAATTGGACTACAGCATCTGTCAAGCAGTGCACTGTGCAGAATGGGAAAAAATCCAAAGGTGGTACTCGGAAGCAGGACTAGAGAGATTTGGATTGAGCAAACAAAGTCTACTATTTGCTTACTTTATAGCAGCAGCTAGCATATTTGAGCCTGAGAGGTCTCGAGAGAGACTTGCATGGGCTAAAACTGCAACATTGCTCGAGACACTTGGGTCCTACATAAAAGATGAACAAACTAGGAGTGGTTTTGTAGATTTGTTCAACAAAAGCATTAACGGACGAAACTTATCCAACAAGAAGTTGAACAAGAACAAGAGAGAGGAAGAACTCCTGGAGATTTTGCTGACAAACCTTGATTACCTTGGGTTCGAAATGCTTCGGAGTCATGGTTGTGAATTGTCCCATTATTTGAATCAAGCATGGCAGGGTTGGCTATCAAGTTGGCAGAATGAAGGGAACAGCTTGGAAAGAGAAGGTGAGCTGATTGTGCAAATCATAAATGTAATGGCTGGCTATTGGTCAGAAGAACTACTGCTGAATCCACAGTACCAGAGGTTGCTCCAAACCACTAATAGAGTCTGTCATGGACTCCGTAATTATCAAAGCAGCAAGGCACATGATAGTGGCAGCCACAAGAGGACAACCTACATGACTACCCCTCAAATAGAATCTGACATGCAAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAGATGGGGTGCACACCAATGTGAAGAATTCATTCCTCACAGTGGCCAAGGGCTTCTACTACCGAGCATACTGTGATCCAGAGACCATAAACTCTCATATTGAAAAAGTTCTCTTTGAAAGAGTGATGTAA 2421 0.4197 MASQFAFTLSHRLPSSCATPAAKSFNSVCSYIRSSYGIFRGTRPPLLFTESKHTKTSGVQPICSRTLEIVAEVSQDNILKDGNIDKEGLNLEIQKKINVVKLILDSKEDGAITISAYDTAWVALVKNVEDTNSPQFPSCIEWIANNQLHDGSWGDAELFIAHDRILNTLACVLALRSWNMHPQKCEKGMKFFKENLYKLQDENPEHMPIGFEITFPSLLDLARSLDVEVPDESPILKNIIAMRDVKLKKIPREILHKEPTTLLHSLEGMQNLDWKQLLKLQCQDGSFLFSPSSTAYALIQTKDESAHKYLDKTLQKFNGGVPNVYPVDLFERTWIFDRLDRLGISRYFQSEIKDCVAYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSASVFKNFEKNGEFFCFSGQSNQAVTGMFNLYRASQVLFQGEKILEDAKNFSAKFLSEKREANELLDKWIITKDLPGEVGYALDMPWYASLPRVETRFYLEQYGGSSDVWIGKTLYRMPFVNNDVYLELAKLDYSICQAVHCAEWEKIQRWYSEAGLERFGLSKQSLLFAYFIAAASIFEPERSRERLAWAKTATLLETLGSYIKDEQTRSGFVDLFNKSINGRNLSNKKLNKNKREEELLEILLTNLDYLGFEMLRSHGCELSHYLNQAWQGWLSSWQNEGNSLEREGELIVQIINVMAGYWSEELLLNPQYQRLLQTTNRVCHGLRNYQSSKAHDSGSHKRTTYMTTPQIESDMQELVQLVLQNSSDGVHTNVKNSFLTVAKGFYYRAYCDPETINSHIEKVLFERVM* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1577 806 Gene3D Farnesyl Diphosphate Synthase 533 806 IPR008949 -
Pvu1g1577 806 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 89 803 - -
Pvu1g1577 806 Gene3D - 116 328 - -
Pvu1g1577 806 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 91 513 - -
Pvu1g1577 806 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 284 503 IPR008930 -
Pvu1g1577 806 Pfam Terpene synthase family, metal binding domain 523 678 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu1g1577 806 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 89 803 - -
Pvu1g1577 806 SFLD Terpene Cyclase Like 1 N-term 91 513 - -
Pvu1g1577 806 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 117 299 IPR008930 -
Pvu1g1577 806 Gene3D - 100 530 IPR036965 GO:0010333|GO:0016829
Pvu1g1577 806 SUPERFAMILY Terpenoid synthases 518 778 IPR008949 -
Pvu1g1577 806 Pfam Terpene synthase, N-terminal domain 273 479 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1577 Pvu-Chr1 40706215 40712017 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1577 K04120 - gmx:100807519 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1577 1 40706215 40712017 Pvu1g1577 1 40706215 40712017 ECH