Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1574 ATGGATCGAACCAGAGGAAGATCGTCCTCTATGTCCGCAAACGCCTTCCCTAGACGCCGTCATCCTAATATCTCCCTCCGACCCACTTCTCAGGAGGTGCAGGGGATGAGGTTAAAGGATGATAATGATGACGATGATAATAATAATAAGAGGGAGTGGACGAAGAAGAGGAGAGGGAGCAACTCTCACAGCACCGAGGAAGAGAGTGTGGGGAATGAACAAGACGCGCGGATGCATTCTAATAATACGGCGTCGTCCGCATCTGATCATAACCACCGGGGACGGAACGTAATCGATGAAGTGATGATCGGAGCTACAGTGCCCAGGAGGACTCGATCAGCTTCTGTGAAAAGACCACATCACAGTTCGGTCGAGGAGCAGAGTGCTGAAGCTGCGTCGCCTTCTTCTTCCAATGCTTCTCTTCCCAAGAGGATGAAAGCAATTGGACCGTCTTCGTCGAATCAGGAGGACATTGAGATTGAGATAGCTGAGCTTCTGTACAGTTTAAGAGCTTCCCAGAACCATGATTATTCTTCTTCGCAGAAGGTTGAAGCAAGTGATTCGCCTCCACTTTCGTTTTACCCTGCCATTGATGTTGAGAAGAAGAAAGTGGAAGGATACAGTCCTTCTTTTTTCACTCTACCTCCGAACAATTCAGTTCCCGAGTTAGTCGTAATTGAATGTCAGCAACCTGCGAAAACGGAGAAAACTTCGTCCGAATCGCCTAGGACGTCTGGTGGTCATGGAATTGGATCTTCCCAGGGTCCAAAACAGGAAACAGAGGGAAATAATTTGAGTCCAGGTTGTGGATGTGGAGATGCTGTAGATGGAAAATCAGAATCCATGTTGGATGTCGACAAACATGATTGTGCTTCTACTGTAAGGACATGCGATGATGTTTCGGGCGGCAAAGACAAACACAAGTTTGAGATTGATCTAATGGCTACCCCTCCTGTGACCTTATCGCCAGAATGGGATAACTTGTCTAGGGGTGAAGACAGTAACAAGGTTGAAGACAAGATAGAAAGTTTCAGTAAGAAGGAGAAAACACTGGGAGAAATTGAAGTGGTGAAAATGAAAGTTGATTTGGAGAAGTCAAATGAACATAATGACCTAACGACAAACCATGAATCAGGAGAGCTGGGTAGGAATACGGAACAACCATCTACTAATCCCAAACTGGAGAAAACTGCTCAATGTAGTGCAATGTCTTTTTCAGTGGCTGTATCCGAAAGGCCAAGCAGTTTCTCTCCCCTTGGTTACATGCCGCCCATGGGGACAGCTCTGAAGACAGATAACACAACAGGATTATTGACAACCCCTCAACATGGGAACTTTGCTCTGTCTCAACCTCGACCCAAGAGATGTGTAACCCATGGTTACATTGCTCGGAACATCTTCATGCACCAACAGTGCACAAAGATGAATACCCTTTTGCCGTCTGCAATTGGCTGTGGTTCTATGTGCGACACAAAGCTCAGCAAAGTCCATTCAGCTGAAAGTGTAGTTGTTGGGAAGCAGTTTCATAAACAGTCACCAGTCGTCAGCCATAATGCTGAACCGGAGAAGGGATGGGCTACCTCTAGTGATTTTAGTCTTGCTGCAATGAAAAGAAGTTCTGGTCCTGCCAACTCAATGGATATGACCCAAATGAAGCAGCTTATGCTTCAGCAAGGTCCACATTCAGGGTCTTCTGCTAATATAGTGCATGGTCCTGCTTTTCTAATTCCTCATGGCCAGCATCAAGCATCTGTAATAACAGGTACTAGTAGTCCAGCTGGTGGTGTGAACAACGCTAGCACTGCTTCCTTGTCTAATAAATTCCAAAGTTCCCCAGCTGTATCTCTTGGTGCCCCCACACTGCCAGCAGTTGCTGCTGCAATGAGCTTTAGCTACCCAAATTTGGCAGCCAATGATGCTCCATACATGACAATAGTTCCGAATAGTGGGTATCCATTCCCCTTTTCAACTCCCCTTGGACCATCTGCAGCTATCAGAGGTGCAAGCCCTGCACAGTCAACACCTATTCTCAATGGACCTTTGTACTCTTCTCAGATCTTCCACCCACTTCAGTATCCACAACAGCATCCTCACTCCCAACCACTTGTTCAACCTAGTTATCTTAATGCTAGCACATCTAGTGTTTCATCATCATCCCATAAGCAGTCGCAGGGAATGCAAGGTAACAACAACCATATTTTGTCATCCACAACTATGCAACTTCAGCAGTCACAAAAGCAGCACACCTCACAACCTCATCTTCGTAAGCATGAGACTGGGATGGCCAGAGAGAATGCTCCATCTGCTCCAAGTGGAACAGCTTACTCCCAAAAGCATGTATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGAGCCTTTCTTTAACGCCATCTGCAACATCAGATAGTGTTGGTGGGAACAGTGGAAATTTTGGTGACAAGCAGCAACAGACTTTGATGGGGGGACTTGAGCATATTCCATCTCAACCACATGCAATCTCATTTGCTGCATATAATGGGACAAGTGTTCCTTCAAATCTCAACTTCTCAACCGTGGCACAAAACCCAGTGGTATTTCAGAGCCTGCCAGATATTGCATGGCAAGGATATCATGCTGCAAGTACATCTCATGCAACTCAACAAAAGATGTATCCTATAATAGAAGGGAACAGTGGGGATAGTTCTTCCCACCGAGATGATGAAAAGAAAGCCACTTCCGGAAAGCCATCAACCAACGGAACAACAACCCTTGTTTTTGATAATTCAGCAAAGAATCTTAGCTTAGTTTCATCTCCCATGAATGGAAATTGGCCTAGTCGTTCCATTACTTCAACTGCAACAACCACAAGTTTGCCTCTTTCTAGTAATGCTGCAAAGTCTCAACAGGCATCACAGCTGCTTCATCTTCAGCAGCAGCATGGAATGTTACAGCAGCAACCTGCTATGGCTACTCGATATAAAGCCTCGTCAACTAATGCTACAAGTGGTGCAAATTATTTTACTTCCCCAGTTTATTCACAAACTCAAACTCAGAGCAAAAGTTCGATTAAAGGCTCCCAGTCTAAAATCTGTGTAACAGCCCCGGATTCTCTTGTTCATAACCCATGCATCATAACTTCTACCGCCCCAACTCTCCAAAGTTTTTCTCAGGATCAAGGAAGAGTTTTGCAGGGTCATACCCAAATATCTTTTGGTGGAAATTACATATCGTCCATGCCACTCCAAGGGCAACAGCTATTCAATAACAACCAGTCTCTTGGTACAACAGTTGCAGGAATTCCACCTAGTGGAGCCAACTTGAAGACAAATTCCCAGGGGAGCAAGGTTAGTTCATCAGTGAACTCTTCGCAGATGCAACAAACTGAGAATTCTTCCACTGGAACTGGCCAAAAATCTTCCCCAGTTTGTGGGAGAAATGTCCCATCGATCTTGAGCTCGTGCCCCAGTCACTTATCTGAGCTAAAGTATTAG 3474 0.4542 MDRTRGRSSSMSANAFPRRRHPNISLRPTSQEVQGMRLKDDNDDDDNNNKREWTKKRRGSNSHSTEEESVGNEQDARMHSNNTASSASDHNHRGRNVIDEVMIGATVPRRTRSASVKRPHHSSVEEQSAEAASPSSSNASLPKRMKAIGPSSSNQEDIEIEIAELLYSLRASQNHDYSSSQKVEASDSPPLSFYPAIDVEKKKVEGYSPSFFTLPPNNSVPELVVIECQQPAKTEKTSSESPRTSGGHGIGSSQGPKQETEGNNLSPGCGCGDAVDGKSESMLDVDKHDCASTVRTCDDVSGGKDKHKFEIDLMATPPVTLSPEWDNLSRGEDSNKVEDKIESFSKKEKTLGEIEVVKMKVDLEKSNEHNDLTTNHESGELGRNTEQPSTNPKLEKTAQCSAMSFSVAVSERPSSFSPLGYMPPMGTALKTDNTTGLLTTPQHGNFALSQPRPKRCVTHGYIARNIFMHQQCTKMNTLLPSAIGCGSMCDTKLSKVHSAESVVVGKQFHKQSPVVSHNAEPEKGWATSSDFSLAAMKRSSGPANSMDMTQMKQLMLQQGPHSGSSANIVHGPAFLIPHGQHQASVITGTSSPAGGVNNASTASLSNKFQSSPAVSLGAPTLPAVAAAMSFSYPNLAANDAPYMTIVPNSGYPFPFSTPLGPSAAIRGASPAQSTPILNGPLYSSQIFHPLQYPQQHPHSQPLVQPSYLNASTSSVSSSSHKQSQGMQGNNNHILSSTTMQLQQSQKQHTSQPHLRKHETGMARENAPSAPSGTAYSQKHVFGQNFPIPVQPLSLSLTPSATSDSVGGNSGNFGDKQQQTLMGGLEHIPSQPHAISFAAYNGTSVPSNLNFSTVAQNPVVFQSLPDIAWQGYHAASTSHATQQKMYPIIEGNSGDSSSHRDDEKKATSGKPSTNGTTTLVFDNSAKNLSLVSSPMNGNWPSRSITSTATTTSLPLSSNAAKSQQASQLLHLQQQHGMLQQQPAMATRYKASSTNATSGANYFTSPVYSQTQTQSKSSIKGSQSKICVTAPDSLVHNPCIITSTAPTLQSFSQDQGRVLQGHTQISFGGNYISSMPLQGQQLFNNNQSLGTTVAGIPPSGANLKTNSQGSKVSSSVNSSQMQQTENSSTGTGQKSSPVCGRNVPSILSSCPSHLSELKY* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 377 395 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 173 187 - -
Pvu1g1574 1157 PANTHER PROTEIN TIME FOR COFFEE 1 1157 IPR039317 GO:0042752
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 365 395 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 75 91 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 34 74 - -
Pvu1g1574 1157 PANTHER TIC-LIKE PROTEIN 1 1157 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 231 265 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 227 278 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 173 193 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 710 776 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 710 749 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 1093 1140 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 1 155 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 887 919 - -
Pvu1g1574 1157 MobiDBLite consensus disorder prediction 126 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1574 Pvu-Chr1 40674211 40679650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1574 - - vra:106757719 1831.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1574 1 40674211 40679650 Pvu1g1574 1 40674211 40679650 ECH
Pvu1g1574 1 40674211 40679650 Pvu7g1774 7 40553676 40559213 PCT