Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1559 ATGGAATCAACTCATGTAATAGCCATTACAAATAGAGAAGAGGATAATATAAGGAAGGAGAATAAAATGTTCCAATTTCAACTTCCACCCATCATTTCCCAACTTGGGAAAAATGAAGTTCATTGTCTCTCCACCATTACTTCCAATCCCAGACACAAGCAGATGCATAGAGACCAAGACACCAGGAAGATTATCCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTCTACCTCTTGAATCCTCTCTTTAAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTTGTCATGTTTGAGTTCTCTGCAGGAGCCACACTAGGAAAGGGCTTCAACCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTAGTAGCACTTTTTGCTCAAAGCATTGGGATTCACAGGGTTGGCAACTCGATCATAATCGCTGTTTCTGTTTTTATATTCGGATCATTTGCGACGTATCTTCGACTGATTCCAAGCATAAAGAAAAGATACGATTATGGAGTGATGATATTCATTCTGACTTTCAATCTAGTTGTGGTTTCTGGCGCACGTGTGAATGTTAAAGTGTGGGAATTAGCCCGCGAACGTCTCTTGAATATACTGATTGGCTTCATTGTGTGCGTTTGTGTAAGCTTGTTCGTCTTTCCTTTGTGGGCAAGTAATGAACTTCACGATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGTTGTTTAGGCGAATGTACCAAAACCATTGATGAAAAGGAAAATCAACCCCGCTTTAGCTTCAACGTTTGCAATTCAGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTGTCCTACCCTTGGGGAAGGTACTTAAAGATTGGGGAGATTCTTCGAGAAATGGCAGCATTTATTCTTGCAACGGGTCGTTGCCTTGAAGCATCAAAAGAGCCCATGGCCACTTTGAGAGAATCAGAATGGGTCCATTTAGAAACATGCGAAGCACTTGAGTCAAAGGTTGCGTGCATTCTGCGAGAACTAGGAGACAGCATTAAGAAAATGATGAAATGTGATGCAGAGGGTTGCGTTTCGGAGCAGTTGAAAGCCGCCAGAGAAGATTTAAGCTTCATAATTTCCACCTCCAAAATGGCACAACTTGAGGATGCTCAAGTGCTAGCCATTGCTACCTTCGTGTTCTTGCTCATGGAACTCATAGGGAAGGTTGAGGAATTGGCCAAAGAGGTGGAGGAACTTGGAGATATCGCTGGTTTTCGCACCCCAATACCTGCATTTTCTTAG 1353 0.4265 MESTHVIAITNREEDNIRKENKMFQFQLPPIISQLGKNEVHCLSTITSNPRHKQMHRDQDTRKIIHCIKVGISLVLVSLLYLLNPLFKQVGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLVALFAQSIGIHRVGNSIIIAVSVFIFGSFATYLRLIPSIKKRYDYGVMIFILTFNLVVVSGARVNVKVWELARERLLNILIGFIVCVCVSLFVFPLWASNELHDSIVSRFLDLANTIQGCLGECTKTIDEKENQPRFSFNVCNSVLNSKSKDESLANFAKWEPWHGKFGLSYPWGRYLKIGEILREMAAFILATGRCLEASKEPMATLRESEWVHLETCEALESKVACILRELGDSIKKMMKCDAEGCVSEQLKAAREDLSFIISTSKMAQLEDAQVLAIATFVFLLMELIGKVEELAKEVEELGDIAGFRTPIPAFS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1559 450 Coils Coil 419 439 - -
Pvu1g1559 450 Pfam Aluminium activated malate transporter 59 437 IPR020966 GO:0015743
Pvu1g1559 450 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 443 - -
Pvu1g1559 450 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1559 Pvu-Chr1 40350685 40352557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1559 59 398 Miscellaneous Gene Families AT5G46600 41.834 3.85e-88 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1559 - - gmx:100802201 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1559 1 40350685 40352557 Pvu1g1559 1 40350685 40352557 ECH
Pvu1g1559 1 40350685 40352557 Pvu7g1761 7 40353586 40357116 PCT