Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1558 ATGAGTATACCAACAAAATGTGTAATAATTGGAATTGGTTTGTTGTGGCTGTGGAGTGTTGCTGAGAGTGTTCCCAACACGAGCATCATCAACGTTCTCTGCAACAGTGGGGTGTTCACCTCAGGGGACCCTTTTGCCATCAGTTTAAGTTATGTTTTGGGAGACTTAGAGAAGGAAACAGGAACACAAAAGAGTTATGAGTACCACAACATTTCACCATATCCTAATGCCTATGCCTATGGGCATGCTACTTGTAACCTTAATCTCACATCCTCTGATTGCAAAACATGTCTTGGTGCTGCTAAAACGGCCTTGTTTACCACATGCCAGGCACCACGGATAGGAGCTCGTTCAGTGCTCCATGATTGTACAATCAGGTACGAGCAATACCCATTTGACGATTAG 405 0.4395 MSIPTKCVIIGIGLLWLWSVAESVPNTSIINVLCNSGVFTSGDPFAISLSYVLGDLEKETGTQKSYEYHNISPYPNAYAYGHATCNLNLTSSDCKTCLGAAKTALFTTCQAPRIGARSVLHDCTIRYEQYPFDD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1558 134 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Pvu1g1558 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
Pvu1g1558 134 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Pvu1g1558 134 Gene3D - 26 132 IPR038408 -
Pvu1g1558 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1558 Pvu-Chr1 40348728 40349132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1558 - - gmx:102664018 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1558 1 40348728 40349132 Pvu1g1558 1 40348728 40349132 ECH
Pvu1g1558 1 40348728 40349132 Pvu7g1759 7 40345396 40349737 PCT