Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1557 ATGAATGTATGTGTGTTTTGTGCTTTGCTCCTACCCAACGAGATGAACAAGAACGATTCTCCAAAGGATTCGGGCGACAACTCCGTGACCCACTTTGATTTTCTCAAGAAATTTAAACGCTTTTCCACTCTTGACTCTTCTCTTGGAGTTCTCGCTTTCTTCTTCCTCGCTTCTCTCTTCATCGCTTGCTTCTTCTACTTGGATTACAAAGGGTTCCGCTCCCGAGCCACCTCTATCCTTGACTTCCATTTTTCACCACCTTCAACTTCTTCTGTTACTTCTTCTTCTGCTTTTCAACCGGTTCAGTTTCTGAGCCCAGATGGTGATACCTGTGATGTCTTTGATGGGAATTGGGTTTGGGATGAGACTTATCCCCTTTACAATTCCGCCAACTGTTCCTTCTTGGATCAAGGTTTTCGCTGCTCAGAGAATGGCAGGCCTGACACATTCTACACAAAATGGCGATGGCAACCCAAGGATTGCAACTTGCCTAGGTTTGATGCAGGGAAGATGTTGGAAAAGCTACGGAACAAGCGACTGGTTTTTGTTGGTGATTCAATTGGAAGAAACCAATGGGAATCACTCCTTTGTATGCTCTCTTCGGCAATTCCAAATAAGGCTCGGGTCTACGAAGTTAATGGGAACCCAATTACAAAGCACACAGGCTTCTTGGCATTCAAGTTTGAAGATTTCAACTGCACCATTGAATACTATAGATCACCGTATCTTGTAGTGCAGGGACGACCTCCTTCTGGTGCACCTGATGGGGTAAGAATGACTTTGAGACTGGATCACATGGACTGGATTTCACATAAGTGGAGGGATGCAGATGTGCTGGTTCTCAATGCTGGACATTGGTGGAATTATGAGAAGACTGTCAAAATGGGCTGTTACTTCCAAATAGGGGAGGAAGTGAAGATGAATATGACTACTGAAGACGCATTCAGGAAATCAATAGAGACAGTAGTTGATTGGATTGCGAATGAAGTAAACATAAACAAAACTTACGTCCTTTTCCGAACTTATGCTCCTGTCCATTTCAGGGGTGGTGACTGGAATACTGGTGGTGGTTGTCACATGGAAACATTACCTGATTTAGGTTCCTTGCCAGCAGTATCCGACATCCATTTCAGAACCGTCGTCGATGTCTTATCATCAGAACGCAGAAAAAGATCAGAATTTTTGAATCCGGACTTGCTTAATGTCACACAAATGTCAATTCGCAGGAGAGATGGCCATGCATCCATTTACTATCTTGGACCAGATGGTACAGCCCCAATGCAGCGGCAAGACTGTAGCCATTGGTGCCTACCTGGTGTTCCCGATTCATGGAATGAGCTTCTTTATGCCCTTCTTCTCAAGAGGGAGGAATTTTGGGAACAGAGAGAGAATACCACAAATGTTTCTCAAGTTCCTCTATAA 1422 0.4423 MNVCVFCALLLPNEMNKNDSPKDSGDNSVTHFDFLKKFKRFSTLDSSLGVLAFFFLASLFIACFFYLDYKGFRSRATSILDFHFSPPSTSSVTSSSAFQPVQFLSPDGDTCDVFDGNWVWDETYPLYNSANCSFLDQGFRCSENGRPDTFYTKWRWQPKDCNLPRFDAGKMLEKLRNKRLVFVGDSIGRNQWESLLCMLSSAIPNKARVYEVNGNPITKHTGFLAFKFEDFNCTIEYYRSPYLVVQGRPPSGAPDGVRMTLRLDHMDWISHKWRDADVLVLNAGHWWNYEKTVKMGCYFQIGEEVKMNMTTEDAFRKSIETVVDWIANEVNINKTYVLFRTYAPVHFRGGDWNTGGGCHMETLPDLGSLPAVSDIHFRTVVDVLSSERRKRSEFLNPDLLNVTQMSIRRRDGHASIYYLGPDGTAPMQRQDCSHWCLPGVPDSWNELLYALLLKREEFWEQRENTTNVSQVPL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1557 473 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 39 460 - -
Pvu1g1557 473 Pfam PMR5 N terminal Domain 110 162 IPR025846 -
Pvu1g1557 473 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 163 450 IPR026057 GO:0016740
Pvu1g1557 473 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 39 460 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1557 Pvu-Chr1 40343526 40347528 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1557 - - gmx:100779356 843.188