Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1554 ATGAAACTCGTCAGGTTTCTCATGAAGCTGAACAACGAAACCGTTTCGATTGAGCTTAAGAATGGCACTGTTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACTCATTTAAAAACAGTTAAACTAACTCTGAAAGGGAAAAACCCAGTTACTTTGGATCATTTGAGCGTGAGAGGCAACAACATTCGTTATTATATCCTTCCTGACAGCTTGAATCTTGAGACATTACTGGTTGAAGAGGCTCCAAGGATCAAGCCTAAGAAGCCAACCGCTGGGAAGCCTTTGGGGCGAGGTCGGGGACGAGGGCGCGGACGGGGCCGTGGTCGTGGCCGTTAA 345 0.4667 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRIKPKKPTAGKPLGRGRGRGRGRGRGRGR* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1554 114 MobiDBLite consensus disorder prediction 85 114 - -
Pvu1g1554 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 1 110 - -
Pvu1g1554 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 110 IPR027141 GO:0006396
Pvu1g1554 114 Pfam LSM domain 5 69 IPR001163 -
Pvu1g1554 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Pvu1g1554 114 SMART Sm3 5 70 IPR001163 -
Pvu1g1554 114 MobiDBLite consensus disorder prediction 93 114 - -
Pvu1g1554 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
Pvu1g1554 114 Gene3D - 1 49 - -
Pvu1g1554 114 Gene3D - 50 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1554 Pvu-Chr1 40315721 40322148 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1554 K11087 - jre:109010907 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1554 1 40315721 40322148 Pvu1g1554 1 40315721 40322148 ECH