Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1550 ATGGAGATTTTGAACCTAATAACAGTGGCTTTGGCATTGCTAGCATTAGTGCCAAAGATGGAGAGCCATATAAGGCCCCCACTCATTCCTGTATCAAAGGCTCCACGTCCTCTTTGTGCATCACAATTTGCACTGGTGAACTATGCATGTTCCAGGTTGCCTTTCAGCCCTGGAGTGCAACCAGATTCTCCTCCATCCCCAGATGAGGAAGAAGGTCACGGAGAAAGGCACCAAAATCACACTCACAGACATGGCCACAGACATGGACACAGTCACAGGCACCACCAGACCCCTGAGGAAAACAACTGTTGCCGGTGGGCCAAGGAAGTCGACAGCCAATGTGTGTGTGAAATTCTGGTTCACTTGCCACCCTTCCTTATCAGACCTGTGCATCAGTACACACTCAACATTGGAGATGCGTGTGACGTCACTTACTCTTGCGGTGCACCAATCTGA 456 0.4978 MEILNLITVALALLALVPKMESHIRPPLIPVSKAPRPLCASQFALVNYACSRLPFSPGVQPDSPPSPDEEEGHGERHQNHTHRHGHRHGHSHRHHQTPEENNCCRWAKEVDSQCVCEILVHLPPFLIRPVHQYTLNIGDACDVTYSCGAPI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1550 151 PANTHER - 2 151 - -
Pvu1g1550 151 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 151 - -
Pvu1g1550 151 MobiDBLite consensus disorder prediction 56 98 - -
Pvu1g1550 151 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 87 145 IPR036312 -
Pvu1g1550 151 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1550 Pvu-Chr1 40268026 40268481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1550 - - var:108327563 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1550 1 40268026 40268481 Pvu7g1749 7 40271790 40272200 PCT