Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1547 ATGGGGGCTTCGGAATCAGTCTCGGAAAAGTCCATCCATGAATTCACGGTCAAGGATGCCAAGGGCAGAGACGTGAACCTCACCACCTACAAGGGGAAGGTTCTTCTTGTAGTTAATGTCGCTTCAAAATGTGGATTTACGGATTCCAATTACACCCAGTTAACTGAGCTTTACGGCAGATGCAAAGACAAAGGTTTTGAGATACTGGCATTTCCATGCAACCAGTTTTTGAAGCAAGAGCCGGGGAATAGCTTGGAGGCAGAGCAATTTGCCTGTACAAGGTACAAGGCTGAGTATCCCATCTTTCGAAAGGTACGTGTGAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAACCAGGATGTATGGGTTCTAGGATAAAGTGGAATTTCACTAAGTTTTTGGTTGACAAGGAAGGGAATGTCCTAAAGCGTTATGGTCCAACCACCTCACCACTGTCCATTGAAAAGGACATCAAGATGGCATTGGGGTAG 507 0.4497 MGASESVSEKSIHEFTVKDAKGRDVNLTTYKGKVLLVVNVASKCGFTDSNYTQLTELYGRCKDKGFEILAFPCNQFLKQEPGNSLEAEQFACTRYKAEYPIFRKVRVNGPDTAPVYKFLKANKPGCMGSRIKWNFTKFLVDKEGNVLKRYGPTTSPLSIEKDIKMALG* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1547 168 PANTHER GLUTATHIONE PEROXIDASE 1 167 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 Gene3D Glutaredoxin 3 168 - -
Pvu1g1547 168 ProSiteProfiles Glutathione peroxidase profile. 2 168 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 PIRSF Glutathion_perox 1 168 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Pvu1g1547 168 PANTHER GLUTATHIONE PEROXIDASE 5-RELATED 1 167 - -
Pvu1g1547 168 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Pvu1g1547 168 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Pvu1g1547 168 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1547 Pvu-Chr1 40240544 40243523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1547 - K00432 gmx:100306136 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1547 1 40240544 40243523 Pvu1g1547 1 40240544 40243523 ECH
Pvu1g1547 1 40240544 40243523 Pvu7g1745 7 40253026 40253737 PCT