Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1545 ATGGCGAGTATTGCAGATATTAGTCTTTCGGCATCCATCAATCTGTTGACTGCATTGGCATTCCTGTTAGCATTTGCAGTATTGCGACTTCAGCCCTTTAATGACCGGGTCTACTTCCCAAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACAGGTTCCTCAACGGTAAAGAAATTTGTTAACTTGGACTGTGGGACCTACATCAGGTTTCTGAACTGGATGCCTGCAGCATTGCGTATGCCAGAACCAGAACTTATTGATCATGCAGGCCTTGACTCAGCAGTGTACATTCGAATATATCTTCTAGGGTTCAAAATATTTGCCCCCATTACCCTGCTTGCTTTTATGGTTTTGGTTCCTGTTAACTGGACAGGGAAAACATTGGAAGCACCGGGAACTAAGAATTTGACTTATAGCGATATTGACAAGATTTCAATATCAAACATTCCATTTGGATCAGATAGGTTTTGGGCGCATATTGTAATGTCATATGTCTTCTCATTTTGGACATGCTATAGTCTCTATAAGGAGTACAAGAATGTAGCAGCAATGAGATTGCGATTTGTGGCAGCTGAAAGTCGTCGTCCGGACCAATTTACTGTCCTGGTGAGGAGTGTTCCCCCAGATCCCGATGAATCTGTCACTGAGCACATCGAACATTTTTTTTGCGTCAACCATCCTGATCACTATCTAATGCATCAGGTTGTTTATAACGCGAACAAGCTTGCAGCAATAGTTGCACAGAAGAAGCAATGTATGAACTGGTATATTTATTACCAAAACAAATACGAAAGAAGTCCTTCCAAGAGGCCAACTACTCGGACAGGTTTCATGGGTTTATTGGGGAATAAAGTTGATGCTATTGATCATTACTCTGCACAAATTGATAAACAGAGCAAAGAAGAAGCGGAAGAAAGAGAACATGTTATAAACAATCCGGAAGCTGTTATTCCTGCAGCTTTTGTTTCATTCAAAACACGATGGGGGGCTGCTGTGTGCGCTCAAACTCAGCAAACCAGTAATACTACAATTTGGCTCACAGAATGGGCTCCTGAGCCTCGGGATGTCTTTTGGGAAAATCTTGCAATTCCATATTTTGACCTCAGCATGAGAAGATTGGTCATGACCGTTTCTTTATTTTTGCTGACATTTTGCTTTATGATACCAATAGCATTTGTCCAATCTTTGGCCAACATTGAGTCAATTATGAAGGTCTTTCCTTTCTTGAAGCCTATAATCCAAAAGCCATCGGTGAAGTCTCTCATTCAAGGATTTCTTCCCGGGCTAGCATTAAAGATATTTCTTGCGTTGCTTCCGAAAATTCTGATGACGATGTCCAAAATGGAAGGTTTTACTTCCCTTTCAGGTTTGGATCGGAGGTCAGCTTCCAAATATTACTTGTTTATTCTCATCAATGTATTCCTTGGGAGTATAATAACAGGAACAGCATTTCAGCAACTTCAGCAGTTTCTTAACCAGCCCTCTACAGAGTTCACAAAAACTGTTGGCAGTACAATCCCCATGAAAGCCACATTTTTCATCACATACATAATGGTGGATGGTTGGGCTGGAATAGCTGCAGAGATTCTCAGGTTATCTCCGTTAATTACTTTCCACCTTAAAAACACATTCTTGGTGAAGACGGAGCAAGACAGAGAGAATGCAATGGATCCTGGAAGCTTGGAATTTTCTACATCTGAACCTCGCATCCAGTTATATTTCGTGCTGGGGCAGGTGTACGCTCCAGTCACACCTTTTCTTCTCCCCTTCATTGTAATCTTCTTTGGTTTTGCCTACTTGATCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATACGAGAGTGGAGCTGCGTTTTGGCCAGATGTCCATGGGCGAGTAGTTACGGGGTTGATTATATCTCAAATTCTTCTGATGGGATTGTTAAGTACAAGAGGTACAGAAACGTCGACGTTAGTGCTTATTGCACAACCCATCTTGACATTCTGGTTTCACAGATATTGCAAAGGTCTCTTCGAATCTGCATTTGTAAAATTTCCACTAGAGGAAGCCATGGTGAAGGATACACTTGAACGTGCTGTTGAGCCAAACTTAAACCTGAGACTTTACCTTCAGAAGGCTTACGTACACCCAGTTTTTAAGGACGATGATTTTGAAAAACCAGTAGTCGTTGATGATGAAGAGGATAATCCACTAATTCAGACTACAAGACCTACTCGGAGTAGCAAAAATGGTAGTGAAACCGGCAGTTGCTAA 2262 0.4169 MASIADISLSASINLLTALAFLLAFAVLRLQPFNDRVYFPKWYLKGIRGSPTGSSTVKKFVNLDCGTYIRFLNWMPAALRMPEPELIDHAGLDSAVYIRIYLLGFKIFAPITLLAFMVLVPVNWTGKTLEAPGTKNLTYSDIDKISISNIPFGSDRFWAHIVMSYVFSFWTCYSLYKEYKNVAAMRLRFVAAESRRPDQFTVLVRSVPPDPDESVTEHIEHFFCVNHPDHYLMHQVVYNANKLAAIVAQKKQCMNWYIYYQNKYERSPSKRPTTRTGFMGLLGNKVDAIDHYSAQIDKQSKEEAEEREHVINNPEAVIPAAFVSFKTRWGAAVCAQTQQTSNTTIWLTEWAPEPRDVFWENLAIPYFDLSMRRLVMTVSLFLLTFCFMIPIAFVQSLANIESIMKVFPFLKPIIQKPSVKSLIQGFLPGLALKIFLALLPKILMTMSKMEGFTSLSGLDRRSASKYYLFILINVFLGSIITGTAFQQLQQFLNQPSTEFTKTVGSTIPMKATFFITYIMVDGWAGIAAEILRLSPLITFHLKNTFLVKTEQDRENAMDPGSLEFSTSEPRIQLYFVLGQVYAPVTPFLLPFIVIFFGFAYLIFRHQIINVYNQQYESGAAFWPDVHGRVVTGLIISQILLMGLLSTRGTETSTLVLIAQPILTFWFHRYCKGLFESAFVKFPLEEAMVKDTLERAVEPNLNLRLYLQKAYVHPVFKDDDFEKPVVVDDEEDNPLIQTTRPTRSSKNGSETGSC* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1545 753 MobiDBLite consensus disorder prediction 725 753 - -
Pvu1g1545 753 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Pvu1g1545 753 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Pvu1g1545 753 MobiDBLite consensus disorder prediction 736 753 - -
Pvu1g1545 753 PANTHER OS05G0393800 PROTEIN 3 743 - -
Pvu1g1545 753 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 743 IPR045122 GO:0005227
Pvu1g1545 753 Pfam Late exocytosis, associated with Golgi transport 9 178 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1545 Pvu-Chr1 40205768 40215587 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1545 K21989 - gmx:100776693 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1545 1 40205768 40215587 Pvu1g1545 1 40205768 40215587 ECH