Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1542 ATGTCAAAAATAGAACGAGAAGAAGGTTACATTCTCGCAGTAGCAGCTTTTGGTTTTCCACCACCGCAGCTCCGTTTTCTCTCCCTCCGTGCAAACATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGAAGAGAAGTAACCGTGGAGCTGAAGAACGATTTGGCCATCAGAGGGACATTGCATTCCGTTGATCAGTACCTCAACATAAAGCTCGAAAACACTCGCGTCGTCGATCAAGACAAGTACCCCCACATGCTTTCTGTAAGAAACTGCTTCATCAGAGGTTCGGTAGTGAGATATGTGCAATTACCTCCAGAAGGGGTGGACATTGAATTGTTGCACGATGCCACGAGGAGAGAGGCTCGGGGCGGTTAG 378 0.4788 MSKIEREEGYILAVAAFGFPPPQLRFLSLRANMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1542 125 CDD LSm2 34 122 IPR016654 GO:0006397
Pvu1g1542 125 Gene3D - 26 124 - -
Pvu1g1542 125 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 33 123 IPR016654 GO:0006397
Pvu1g1542 125 SUPERFAMILY Sm-like ribonucleoproteins 35 124 IPR010920 -
Pvu1g1542 125 SMART Sm3 37 104 IPR001163 -
Pvu1g1542 125 Pfam LSM domain 39 103 IPR001163 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1542 K12621 - vvi:104879775 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1542 1 40181192 40184643 Pvu1g1542 1 40181192 40184643 ECH