Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1540 ATGGTGCAGAGTCTCTGTTTGATGGCTTCTCATGGTTACCCTCCCGGTCTTGTCTTACACCCACAACTGGGTTTGCCCGGCACCAACATGAAGGGCTACCAAATATCCTTTCCTTCTCCAGTAGCAAAAGTAGACCTGATCAGATATCAGTCTCCTTATCTTAAGCAAAGCCCATGTGGGGAGTTAAGGAAAGGCCAGAATGAATGGTTTGATTACAATGAGGTTATTAATGTTGACTCATCAGTTCAAAGTCCGGTGCTTATGGATGAACAAGCAAACTGCTCAAATGCAGTTCTTTTTGGCTTTGGAATTGTTGAACAATGCACTAAGCGTGATGAAATTATAAATATGCTAATGTCTGAGACTGCTGAAGCAGGAATAGATGGAGCAAATTTATCTTTGTTGCCCGACTTAATGAAATTGCAGTTGGCAGGCATTGGTGAATCTCAACAACCATTGTCATCTCTTATCTACCCAACTAACAAATTCATCATTCAGAAGCTTTTACTGCCTCTTGTTCAAGATTCAGCCCTTTCTTCAAAGATCACGGTTCATCCAGATGGTCAAATCACATGTATGGGTACTGCAATTCAGTTGAAAGATCTTCTCTCTGTAGTTGCTGAGTCATACATATCAAAAAGCTCAGGAAAGGGTGAAAAGCAATCTATGCTTGTTCCACACTTCAGTTGGGTGAATATCAATGAATTAGAGAGAAGTCATTCCTCTACATTGAAGAATCAATCCACTTTAGCTGCTCCTTTAAAGAGCCCTGAGAAAGTCAAAGTCAAGCCAGGTCCAAGAAAGAACAAGAAAGTAGGCAGGGACAGGGATCTCTACAAGAACTATTCACATGCATGTGAGACCCTTCTGTCCCTGATGGTTGACAAGAAGCAGCGTGGCAAGACCACAATTATCTCCCTGAAGAAATCGGGCCCTGAGCTTACCGATCTCCTGACACAATTTTCTGCCGGCATTGCTGGAACTGGCCTCGCGGTTCTGCTATCAGTAATGTGTAACCTAGCTTGTGGAAGGTCTACCTTCTGTGCTTCTAGCTTGTTCAACACTGGGTTTGGATTGGGGTTGGTTTGGCTTTCTGGGGCAGTAAATAAGCTCAGGGTCACAATTGTGAGCATCAGCAAAAACGCAGGAAAGTTGGGTTTGAAAGAAGAGAAAATGATGCAGAAGCTGGATAAGACCATAACAGATATTTACTATACTGCTGCAGCATTGCTAGCACTGGTGGTGCTGAGACTTGCTTGA 1260 0.4317 MVQSLCLMASHGYPPGLVLHPQLGLPGTNMKGYQISFPSPVAKVDLIRYQSPYLKQSPCGELRKGQNEWFDYNEVINVDSSVQSPVLMDEQANCSNAVLFGFGIVEQCTKRDEIINMLMSETAEAGIDGANLSLLPDLMKLQLAGIGESQQPLSSLIYPTNKFIIQKLLLPLVQDSALSSKITVHPDGQITCMGTAIQLKDLLSVVAESYISKSSGKGEKQSMLVPHFSWVNINELERSHSSTLKNQSTLAAPLKSPEKVKVKPGPRKNKKVGRDRDLYKNYSHACETLLSLMVDKKQRGKTTIISLKKSGPELTDLLTQFSAGIAGTGLAVLLSVMCNLACGRSTFCASSLFNTGFGLGLVWLSGAVNKLRVTIVSISKNAGKLGLKEEKMMQKLDKTITDIYYTAAALLALVVLRLA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1540 419 PANTHER OS05G0143300 PROTEIN 2 419 - -
Pvu1g1540 419 MobiDBLite consensus disorder prediction 242 273 - -
Pvu1g1540 419 PANTHER PROTEIN, PUTATIVE-RELATED 2 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1540 Pvu-Chr1 40166400 40170764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1540 - - gmx:100777424 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1540 1 40166400 40170764 Pvu1g1540 1 40166400 40170764 ECH
Pvu1g1540 1 40166400 40170764 Pvu7g1741 7 40198819 40203539 PCT