Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g1534 | ATGAATTTCTTTGCATCCGTTTTCTCCGACTCCAACAATGAGCACCAAAACGAATTGCAAGAGCAAGCGAATCACGATTCCTCGCCGCCGGAGCACCAGTCCGATTCCTCCGGCGACGGTGCGTGGGAAATCGGCGATCTGTGGAAAAGGCTGAGCGCGAAATCGGAATTGATCATCGAGACTTACCGTCGCGACCTGCAGGAATTCGGTACCGGTTTGAAGAAGGAGATTGAGGTGGCTCACGGTTCTCTGGAGACGGTGGGCCACGTCATCGACCAGTTCGGGAACACCGTCGCGAAAGGCACCGCTAACATTATATCTCACGGCAAGGACGCCATCCTCCTCGATTCCGAGTCTGATAATGATGTTAATACCAAAAGCAAGCGCGGTACGGAAAAAAAGAGCTTCAATTCGAGGCGCTACAGTCGGTTTGACGCTCAGGTTCGGGCCATTCAGGATGACGTTAGTACTTACACCGAAGTGCCTGAGGATTTAGACGGGTATGAGAAGTGGAAATCGGGGTTTTCGTTGGAGGGGAAGAGCGAGGAAATGGAAGAGTTGCTGAGAGAGAATGAGGGTATGGAGAGTGTTTACAGGAGGGTTGTACCTAATGTTGTTGACCGTGATACGTTTTGGTGTAGGTATTATTATAGAGTTTATAGGTTTAAGAAAGCTGAGGATGTGAGGGCTAGGCTCGTGAGGAGAATGTCGAGGGAGGAGGAGGAGTTGAGCTGGGATGTTGAAGATGATGATGATGAAGAGGAGGAGGAGGAGGAGGATAGTGATAAAAATAGTAAGGGAAAAGAAGGAGATTCTAATGGAACAAAGAGGTCGAATGTGGAAGGGATGTATAAGTCTTGTGAGGACGGGTCTAAGGAAGAAAAGAGCCGTGATTTCCTGCAAAGCAGGGGAATTGGTGATAAGAAGGATGAGTCTGTTGAAGAATCAAAGGTTGACAAGAGTAACAAGGAAATGGGTGATGGGAGCAAGAAAAAAGTGGACGCAGTGGATGACACTGGTAACATGAATGATTCTGGTGTAGATTCTGATAAGAAAGTAATCATGGAAAAGAAGATTGATGATGGAAAAGATTCATTGGTTGCAAATAAGCACCCTGGGAATGAGAAGGAGGAGGACCTCGACTGGGATGAGATTGAGGATCTTAGTAGAATTGATGAAGAGAAGGTAACTCAAACAGGGAGCCCAACCAAAGTTGATTTGCGGAAGCGCCTCAGTACTGCACAAGAAGATGAAGAAGACTTGAGTTGGGATATTGAAGATGATGATGATAAGCCTGCTAATTCTAAGGCTTGA | 1314 | 0.4688 | MNFFASVFSDSNNEHQNELQEQANHDSSPPEHQSDSSGDGAWEIGDLWKRLSAKSELIIETYRRDLQEFGTGLKKEIEVAHGSLETVGHVIDQFGNTVAKGTANIISHGKDAILLDSESDNDVNTKSKRGTEKKSFNSRRYSRFDAQVRAIQDDVSTYTEVPEDLDGYEKWKSGFSLEGKSEEMEELLRENEGMESVYRRVVPNVVDRDTFWCRYYYRVYRFKKAEDVRARLVRRMSREEEELSWDVEDDDDEEEEEEEDSDKNSKGKEGDSNGTKRSNVEGMYKSCEDGSKEEKSRDFLQSRGIGDKKDESVEESKVDKSNKEMGDGSKKKVDAVDDTGNMNDSGVDSDKKVIMEKKIDDGKDSLVANKHPGNEKEEDLDWDEIEDLSRIDEEKVTQTGSPTKVDLRKRLSTAQEDEEDLSWDIEDDDDKPANSKA* | 438 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Pvu1g1534 | 437 | Coils | Coil | 222 | 242 | - | - | |
| Pvu1g1534 | 437 | Gene3D | BSD domain | 133 | 233 | IPR035925 | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 243 | 260 | - | - | |
| Pvu1g1534 | 437 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 79 | - | - | |
| Pvu1g1534 | 437 | PANTHER | PROTEIN, PUTATIVE-RELATED | 79 | 429 | - | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 282 | 338 | - | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 240 | 437 | - | - | |
| Pvu1g1534 | 437 | SMART | wurzfinal6 | 171 | 223 | IPR005607 | - | |
| Pvu1g1534 | 437 | Pfam | BSD domain | 171 | 227 | IPR005607 | - | |
| Pvu1g1534 | 437 | ProSiteProfiles | BSD domain profile. | 171 | 223 | IPR005607 | - | |
| Pvu1g1534 | 437 | SUPERFAMILY | BSD domain-like | 141 | 228 | IPR035925 | - | |
| Pvu1g1534 | 437 | Coils | Coil | 177 | 197 | - | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 349 | 378 | - | - | |
| Pvu1g1534 | 437 | MobiDBLite | consensus disorder prediction | 261 | 275 | - | - | |
| Pvu1g1534 | 437 | PANTHER | SYNAPSE-ASSOCIATED PROTEIN | 1 | 79 | - | - | |
| Pvu1g1534 | 437 | PANTHER | SYNAPSE-ASSOCIATED PROTEIN | 79 | 429 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g1534 | Pvu-Chr1 | 40094783 | 40096469 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu1g1534 | - | - | pvu:PHAVU_001G147700g | 793.497 |
Event-related genes