Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1533 ATGAGACGAATACAGTTACCGTTAAGCCAAACTCAGAAGGTTCGTCTTCAGAAGACTCTAGAACAGTTAGAATCTCTCTCATCCAAGGTCAATTCCGATGCTTCCGTCATCATCGCCGATTCCATTCCCGTCAACCACGAAGACGGCGTCCTCAAGGGACACGGAACCGCCGATCTCAACGGCGAAGTCGTCGCCACCGTCTGCGGTGTCGTTGAGCGCGTCAATAAACTTGTCTACGTCCGCTCTTTACGCTCCAGGTATAAACCTGAGGTTGGTGACATTGTTATAGGTCGTGTTGTGGAGGTTGCTCAGAAGCGCTGGAGATTGGATATAAATTTCAATCAGGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTCCAGAGGCGGAGGACAGCGCTCGATGAGCTAAACATGCGTTGCATTTTTGAGGAAAATGATGTTGTTTGTGCTGAAGTTCGGGGTTTCCAGCATGATGGCTTACACCTTCAAGCAAGGAGCCGGAAATATGGAAAGCTTAATAGAGGTCAACTGCTTTCAGTCCCACCTTATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTGGAGGAGTTTGGTATTGATTTGATAATTGGCTGTAATGGATTCATATGGGTTGGAGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAGGTGAGCCAATCTGATCCACAAGTTTTACTGCATAACAGCGTGAGTCTTGAAGAGCAAGAAAGGAATTATACAATATTGGAGACAAGAAAATACATTTGCAGAGCAGCTAATGCTGTTAGAGTTCTATCAATCTTAAGCTTTAATATGACATTGGAAATCATCAAGGGAATTATTGATCTAAGCCTATCTATGAATCTTGATATACATGAGATGCTTGGTTCTGAGTTTTGTGTTCTGGTTGCCGAAAAAGAGGCTGAAAGGAGAAGCTCAAATAAAAAGAAGCGGTAG 978 0.4315 MRRIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLNGEVVATVCGVVERVNKLVYVRSLRSRYKPEVGDIVIGRVVEVAQKRWRLDINFNQDAVLMLSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQLLSVPPYLVKRQKQHFHHLEEFGIDLIIGCNGFIWVGEHIEAKDDMVEDQVSQSDPQVLLHNSVSLEEQERNYTILETRKYICRAANAVRVLSILSFNMTLEIIKGIIDLSLSMNLDIHEMLGSEFCVLVAEKEAERRSSNKKKR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1533 325 Gene3D - 88 177 IPR012340 -
Pvu1g1533 325 SMART S1_6 90 169 IPR022967 -
Pvu1g1533 325 Pfam KH domain 179 219 IPR004088 GO:0003723
Pvu1g1533 325 Gene3D - 36 87 - -
Pvu1g1533 325 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 320 IPR036612 GO:0003723
Pvu1g1533 325 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Pvu1g1533 325 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Pvu1g1533 325 PANTHER EXOSOME COMPLEX COMPONENT RRP4 10 320 - -
Pvu1g1533 325 PANTHER PNAS-3 RELATED 10 320 IPR026699 GO:0000178|GO:0003723
Pvu1g1533 325 CDD S1_Rrp4 86 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1533 K03679 - gmx:100776358 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1533 1 40085182 40087252 Pvu1g1533 1 40085182 40087252 ECH