Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1530 ATGATGACAGACGAGGAACTGATACAGAAACTTGAAGAGTTAACCATCAACGCCCAACATCACCAGACGGAGACTCTCCGTTCGATCCTTCTTCACAATGGCACCGTGCGCTATCTTCAGCCCTTTAACAACGGTCCTCTTCCTCTTGATCACTCCACTTTCACACGTCTCGTGCCCCTTTCTTCCTATGAAGACTACGTTGATCACATTAATCACATGGCAGATGGAAAAGATGACCCCTTTCTCTCCGTTGACCCTCTCCGCTGCTTCTTTTACAGGCTATTCCCTCCTAGACCTGAAGTGAACAAGATCTTATGGTTTCTCTATGCTGAAAATACGACTACTACTAAATGTGGCTTGAAAGTCATGGCTGCTTCCACATACCCTTTGCAAAGTGGCAATGCTACCCCTCAGCAACTTAATACTTTTTCCAGTCCCCTAGAAGTGATTCTTGGATCTCATGTTGAGCATCAAATGTACTGCCACCTTCTATGTGGTCTTAAGAATCTTGATGTTATAGATGGAATCACAACCCCTTATGCCATAGGCTTGATCAAAGCATTTGGTCTTCTGGAGTCCAAGTGGGGACAACTATGTGATGATCTTGACCATGGATTTCCGTGTAATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTGATTAAGACACTTGGTGGACCTCAGCCAGAATTGGCAAATAGAATAAGGTTAATCTGTGAAGGTAACAACTGGGGTGGAATTGTGCATAGATTGTGGCCAAACACTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAGCAATACTACCAAAAGCTCAAGTACTACGCAGGAGAGGTACCTATTTTAGGAGGAGACTACTTTGCTTCAGAATGCTGTGTTGGTTTAAACTTGGACGTGATGCAACCCCCTGAGACAACACGGTTTGCGATACTTCCAACTTTTGCCTACTTTGAGTTTCTTCCATTTAGCATGAATGAGGACAATGTTAGCAAAGAAACAGTGGACCTTTGCAGTGTGGAGGTTGGGAAGATGTATGAAGTGGTAGTTACTACTTACAGAGGATTTTATCGCTACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCCATAACTCATCTCCAGAAGTAGAGTATGTGATGAGAGCACCTAAATCTCCTTCTGAGATTGTCACTGAGAAGGACTTGATTTCAGCAGTTGAAAATTTTCAACTAGCACTTGGAGATGCTATGAAAATTGAGATTGTTGAGTATGCAAGTTTCTTGGACCAGGGGTCAATGCCGAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCCAATTTTGTGGAGGATAAGCTAGAGGAATCAGTTAGTGTCTTAAGAAGTTGTGTGTCCACTCTCGAGAGTGGCTTGGGAGCTATGTACAAGGTGCAGAGGGATAAAGGCCAACTAAGAAACTTACTGTTATTCATCATAAGGCATGGAGCTTTTGATCAATTATCAGATTTAGCCATTCAGAACGGAACATCAGCTAGTCAATATAAGCCACCCAAGATTATAAGGAATCATGAAGTTGTCAAACTCTTGGAAAATTTAGCCATTGTGACAGTATCGTTTGATGGTTAA 1611 0.4277 MMTDEELIQKLEELTINAQHHQTETLRSILLHNGTVRYLQPFNNGPLPLDHSTFTRLVPLSSYEDYVDHINHMADGKDDPFLSVDPLRCFFYRLFPPRPEVNKILWFLYAENTTTTKCGLKVMAASTYPLQSGNATPQQLNTFSSPLEVILGSHVEHQMYCHLLCGLKNLDVIDGITTPYAIGLIKAFGLLESKWGQLCDDLDHGFPCNEISEGAMREAVIKTLGGPQPELANRIRLICEGNNWGGIVHRLWPNTRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDVMQPPETTRFAILPTFAYFEFLPFSMNEDNVSKETVDLCSVEVGKMYEVVVTTYRGFYRYRLGDIVRVVGFHNSSPEVEYVMRAPKSPSEIVTEKDLISAVENFQLALGDAMKIEIVEYASFLDQGSMPKQLKVFVEVQEESNFVEDKLEESVSVLRSCVSTLESGLGAMYKVQRDKGQLRNLLLFIIRHGAFDQLSDLAIQNGTSASQYKPPKIIRNHEVVKLLENLAIVTVSFDG* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1530 536 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 90 IPR004993 -
Pvu1g1530 536 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 97 532 IPR004993 -
Pvu1g1530 536 Coils Coil 4 24 - -
Pvu1g1530 536 Pfam GH3 auxin-responsive promoter 101 518 IPR004993 -
Pvu1g1530 536 Pfam GH3 auxin-responsive promoter 10 91 IPR004993 -
Pvu1g1530 536 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 90 - -
Pvu1g1530 536 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 97 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1530 Pvu-Chr1 40059523 40062476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1530 8 531 EF-hand Containing Proteins AT1G23160 31.228 6.89e-88 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1530 K14487 - gmx:100786829 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1530 1 40059523 40062476 Pvu1g1530 1 40059523 40062476 ECH