Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1528 ATGGCTATTAAGGAAGATGTGGAGGATGGCACGCAGAAGGGAATAAGAGAGCCACTTGTGGGGGAACAGAACCACCAGCTTGTTCAACCAACCACAGGGCATCCATGGATGGTTTACTTTAGTACATTTGTTGCAGTGTGGGGATCTTATGAATTCGGGACTTGTGTTGGATATTCATCTCCCACTCAAGAAGCTATCAGCAAGGATCTCAATCTGTCTTTGGCAGAGTACTCCTTGTTTGGCTCCATCTTGTCTTTTGGGGCAATGGTTGGTGCAATAACTTCTGGGCCTATAGCTGATTTTATTGGACGTAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTTGCAGGGTGGCTTATAATTTACTTTGCTGAGGGCCCTGTGCCTTTGGACATTGCGAGGATAGCAACAGGCTATGGAATGGGAGTCTTTTCATATGTGGTTCCTGTCTTTATAGCAGAAATTGCACCAAAAGAACTCCGTGGGACTCTGACTACCTTAAATCAGTTCATGATTGTTTCTGGTGTGTCGGTGTCATTCATAATTGGAAATGTACTTTCATGGAGGACTTTAGCTTTAACCGGAATTATTCCCGCTGCTATATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTAAAAAAGATTTTGAGGCAGCACTGCAAACACTTCGTGGAAAAGATACTGATATATCTGAGGAGGCAGAGGAAATTCAGGACTATATAACTACTTTGGAGAGGCTTCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCTCTCACTAACTATTGGAATAGGCCTTATGTTCTGCCAGCAGCTTGGGGGCATCAATGGTGTTTGCTTTTATGTCAGCAGTATTTTTGAGCAAGCAGGATTTTCTACCACCATTGGGACTATATCATATGCTTGCCTTCAGGTTGTGGTCACAGGTCTTGGAGCAGTCTTCATAGATAAAGCTGGCAGGAAGCCCCTACTTATATTATCTGGATCAGGATTGGTGGCAGGTTGCTTATTTGCAGCAGTTGCATTCTACCTCAAGGTTCACGAGGTGGGTGTTGCGGCAGTTCCAGCACTTGCAGTAACAGGCGTACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTCGTGATGTCTGAGATATTTCCTGTGAATATTAAAGGGATGGCAGGAAGTGTGGCCACATTAACGAACTGGTTTGGTGCATGGTTATGCTCCTATACTTTCAACTTCCTCATCAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCAGCAATTAATGCATTGGCTATATTATTTATAATTGTTGTGGTGCCGGAAACGAAGGGTAAGAGCTTGGAACAATTACAAGCAGCCATTAATTCATAG 1422 0.4381 MAIKEDVEDGTQKGIREPLVGEQNHQLVQPTTGHPWMVYFSTFVAVWGSYEFGTCVGYSSPTQEAISKDLNLSLAEYSLFGSILSFGAMVGAITSGPIADFIGRKGAMRVSSAFCVAGWLIIYFAEGPVPLDIARIATGYGMGVFSYVVPVFIAEIAPKELRGTLTTLNQFMIVSGVSVSFIIGNVLSWRTLALTGIIPAAILLLGLFFIPESPRWLAKRGRKKDFEAALQTLRGKDTDISEEAEEIQDYITTLERLPKSRLLELFHRRYLLSLTIGIGLMFCQQLGGINGVCFYVSSIFEQAGFSTTIGTISYACLQVVVTGLGAVFIDKAGRKPLLILSGSGLVAGCLFAAVAFYLKVHEVGVAAVPALAVTGVLVYIGSFSIGMGAIPWVVMSEIFPVNIKGMAGSVATLTNWFGAWLCSYTFNFLISWSSYGTFILYAAINALAILFIIVVVPETKGKSLEQLQAAINS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1528 473 Gene3D MFS general substrate transporter like domains 33 473 IPR036259 -
Pvu1g1528 473 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu1g1528 473 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu1g1528 473 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu1g1528 473 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu1g1528 473 PANTHER - 34 472 - -
Pvu1g1528 473 TIGRFAM SP: MFS transporter, sugar porter (SP) family 38 466 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu1g1528 473 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu1g1528 473 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu1g1528 473 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 460 IPR020846 GO:0022857
Pvu1g1528 473 SUPERFAMILY MFS general substrate transporter 29 467 IPR036259 -
Pvu1g1528 473 Pfam Sugar (and other) transporter 50 469 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu1g1528 473 CDD MFS_GLUT6_8_Class3_like 39 466 IPR044775 GO:0008643|GO:0051119
Pvu1g1528 473 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 34 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1528 Pvu-Chr1 40043166 40047756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1528 1 472 Organic Solute Cotransporters AT5G18840 56.785 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1528 K03444 - gmx:100785248 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1528 1 40043166 40047756 Pvu1g1528 1 40043166 40047756 ECH