Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1524 ATGAAGAAAGGAAAGAGTAAGAATGGCGGCTTGTTGCCGAATTCGCTGAGGATTATCTCTCTGTGCCTAAAGACTGTGTCAACAAATGCCACTACCGTTGCTTCTACTGTGCGCTCTGCCGGCGCCTCTGTGGCCGCATCAATTTCCTCCTCTTCTGATGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAACTTGATCCATCAAACTGCAAACGCATTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGAAGATGCCTCTGGCTTCAGCGAACTGGTCTCAAAGCGCGATGGCCCAGTTTCCTTTCTACAGATGCAGCCCTTCCCTATCGGTGGTGATGGCCACGAGGGATTCAGAAAGTCACATCCTTTACTGTTGGTTGTTTCTGGGGATGATAATAGCAATGTTAACCGGAACAGTACTTGTTTGAGTGGTTTAGAGAGCGATGATAATGTTGAGATGAATTCTGGGAACGATTTCAAATCTTCAACAACCGTTCGGTTTTACTCCTTGAAGTCTCACTGTTACGTTCATGTTCTGAAGTTCCGTTCCACCGTGTGTATGATCAGATGCAGTTCACAGATAGTAGCAGTTGGTCTTGCCACACAAATACACTGCTTTGATGCTGTAACTCTTCAGAATAAGTTCTGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGACAAGGAACAACTGGTGTTAATTTTGGTTATGGTCCGATGGCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACACCCCTCTTCCCTCTAATTTAGGTTGCTTAAGCCCTCAAAACTGCAGTACTTCATCGGGCATTAGTCCATCAACTACTCCAAGAAATGGTAGTTTAGTGGCTCGTTATGCAGTGGAGTCCAGTAGACACTTGGCTGCTGGAATAATCAAATACTGTCAAGATCTGCTTCCTGATGGCTCCTCTTCACCCATGTCATCAAATTCAGGCGTGAAAGTCAATAGGGTTACAGGAATTGATACAGATAATGTGGGCATGGTAGCTGTTAGGGATTTTGTTTCCAAAATGATCATCTCACAATTCAAAGCACACAGTAGTCCTCTTTCTGCACTATGTTTTGATCCTAGCGGGACCCTTCTGGTCACTGCATCTGTCTATGGGAATAACATTAATATATTTCGTATAATGCCATCATTCACATGCAAGAGTTCAGGAATTCCAGGCTCAAATTGGAACTCTTCTCACGTGCATCTTTATAAACTTCACCGTGGAATAACACCAGCTATGATTCAGGACATCTGTTTCAGTAATTTCAGTCAGTGGATTGCAATTGTCTCCTCCAAGGGTACATGTCATCTTTATATTTTATCACCTTTTGGGGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTCCCTACTTCCAGTTTTTCCTCTACCTTGGTGGTATACACCGGGTTCCATTTCTTATCAGCAATCTTTGCCTCCCCCAGCACCTGTTGTCCTTTTCGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTGCTGCGAATTATACAGGAAAAGTTTTTGTTCCATCCGGTGCTATTGCTGCCATCTTTCACAATTCCTTATCTCACTCGCAGCTTGTTAACTCAAAGGCAAACCCCTTAGAGCACATATTGGTATATACACCTTCAGGTCATGTTGTTCAACATGAACTTCTGCCATCTGTTAGTTCAGAAACAAGTGATACTAGTTTGGGAAACCAGTCGACTTCACTCCTGCATATGCAGGAGGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTCTGTAGAAGGTCTGAATGGCCAGAAAGAGAGGATACTTGCATCAATACCTTCGATAGGCAAGGAGGTATTGATAGAGTTCAAGAGAAAATAGGTTATAGTGACATCTATGGATTGGATTTTTTGGGTATAAGTGATGGGGCAGGGGAAAAGATGGTGAAATCTTCTAGTGAAAATATGCAAGAGAGGTTTCATTGGTATCTGTCAAATGCGGAGGTGCAAGGGAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGATTTGTTTCTATTCGATGAGTTCTGTGGGAGATACTTTCAGTGCTACTGGGGAGTTTGAGATTGAAAGGGTCCCTGCTAATGAAGTTGAAATAAAGCGGAAGGAGCTGTTGCCTGCTTTCGACAATTTTTATAGTATCAGATCAAGCTTGAGCGAGAGAGGCCTTGCTGGGGAAAGATATTTAAGGCCTTCATCTCCCGTTCCCAATCAAGGGGATTATAAAGAGACTGCTGATGTGACAGTTATTTGTCATTCAAAGCCAGCATCGCTGAGTTCCACTGAAAGCTCTGATGGAGGATCATCGAGAAGAATTGAAAATCTGCTCGACTTGGATCATGTTGCTTCTAGTTATCAAATACATGGTGAGATATGCCTGGAAAGAACGGGGACAATCAATGTTGAGCCTTCTCTACAAAACCAGATTGTGATGGAAAGTCCATCACGTGTGTTAGGAAACTCAAAAAATGTCGATTTTAATGCTGACCTTATTAGTAGTCCTTTATTCCAGAAGACAAATGTAACTTCTGATGGAAGAGATTCTATAGGTTTTGGGATCAATGAGAACTCAGCATTGGTCCTAGAACATTTTTCACACGAGACTGAATTCGTGGAAGCAAAGCAAGAAGGTGCTGGGATATCTTTAACAGATGGGCACTGCCAAACAGAGGAGCATGATGGAAGTAACCTGTTAACTGAAGTTGCAACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAAAGAGCAACTGGAGGAGGATGAGGAGAATGATGAAACGCTTAGTGATATATTTGATTTTTTCAAAGAAGGTTGA 2928 0.4252 MKKGKSKNGGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSSDDHKDQVTWAGFDTLELDPSNCKRILLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPIGGDGHEGFRKSHPLLLVVSGDDNSNVNRNSTCLSGLESDDNVEMNSGNDFKSSTTVRFYSLKSHCYVHVLKFRSTVCMIRCSSQIVAVGLATQIHCFDAVTLQNKFCVLTYPVPQLAGQGTTGVNFGYGPMAVGPRWLAYASNTPLPSNLGCLSPQNCSTSSGISPSTTPRNGSLVARYAVESSRHLAAGIIKYCQDLLPDGSSSPMSSNSGVKVNRVTGIDTDNVGMVAVRDFVSKMIISQFKAHSSPLSALCFDPSGTLLVTASVYGNNINIFRIMPSFTCKSSGIPGSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLYILSPFGGDTGFRIISSQGEEPSLLPVFPLPWWYTPGSISYQQSLPPPAPVVLFVASRIKYSSFGWLNTVHNSAANYTGKVFVPSGAIAAIFHNSLSHSQLVNSKANPLEHILVYTPSGHVVQHELLPSVSSETSDTSLGNQSTSLLHMQEDEFRVKVEPIQWWDVCRRSEWPEREDTCINTFDRQGGIDRVQEKIGYSDIYGLDFLGISDGAGEKMVKSSSENMQERFHWYLSNAEVQGNFGRLPIWQKSKICFYSMSSVGDTFSATGEFEIERVPANEVEIKRKELLPAFDNFYSIRSSLSERGLAGERYLRPSSPVPNQGDYKETADVTVICHSKPASLSSTESSDGGSSRRIENLLDLDHVASSYQIHGEICLERTGTINVEPSLQNQIVMESPSRVLGNSKNVDFNADLISSPLFQKTNVTSDGRDSIGFGINENSALVLEHFSHETEFVEAKQEGAGISLTDGHCQTEEHDGSNLLTEVATDDVDSSSSHHEKEQLEEDEENDETLSDIFDFFKEG* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1524 975 Gene3D - 27 471 IPR015943 GO:0005515
Pvu1g1524 975 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 8 972 IPR045142 GO:0006914
Pvu1g1524 975 SMART WD40_4 354 394 IPR001680 GO:0005515
Pvu1g1524 975 SMART WD40_4 412 455 IPR001680 GO:0005515
Pvu1g1524 975 MobiDBLite consensus disorder prediction 924 966 - -
Pvu1g1524 975 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 8 972 - -
Pvu1g1524 975 SUPERFAMILY WD40 repeat-like 170 454 IPR036322 GO:0005515
Pvu1g1524 975 Pfam Breast carcinoma amplified sequence 3 501 743 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1524 Pvu-Chr1 39969412 39975976 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1524 - - gmx:100785780 1561.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1524 1 39969412 39975976 Pvu1g1524 1 39969412 39975976 ECH