Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1523 ATGGACGTCGCTTCCTACTCCCTGCTTTTCATGTGCTTTCTTCAATCGGTCAGAGGAATATTAGACCCCAACGATTTCCTCGCTCTGCAATCCATTCGGAAATCGCTTCACGATGTTCCCGGTTCAAATTTCTTTGCGTCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTATACTGCGCCAACGATAAAGTCGTCGCGCTTAACCTCGGCGACCCCAGGGCCGGTTCGCCCGGTCTGACTGGAAAACTAGACCAATCGATCTCCAAGCTATCTGCTCTCGCCGACCTCACCGTCGTTCCCGGAAGAATATACGGCCCTCTCCCCAACTCTCTCTCCCAATTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAATTTCATCTCCGGCGAGATTCCGGCGGGTTTAGGTCAGCTTCGCAATATTAAAACCATCGATCTGAGTTACAATCAGCTCACCGGAACAATTCCTGCGTCCATCGGAACCTTACCGCAGCTAACCAACCTTATCCTCTGCCACAACCGCCTCTCCGGTTCAGTTCCCTCGTTCGCCTCGGCTTATTCCCTAACCCGGCTCGAACTGAAGCACAACACTCTCTCCGGTTCCCTCGCACCGTACTCTCTCCCTCCCTCCCTACACCACCTCTCTTTATCATGGAACAAACTCACTGGACCCATGGACCGCCTCTTAACCCGCCTCAACCGGCTTAACTACTTGGACCTTAGCTTGAACCAGTTCACAGGCCCAATTCCAGCCCAAATATTCTCATTCCCCCTCACCAATCTACAACTCGAAAGAAACCAATTCTCCGGCCCGGTCCACCCGGTCAACGAGGTGACGATTCAGACCGTTGATCTCAGCTACAATAGGTTATCCGGTGAGGTGTCGCCCATGCTAGCGAGCGTTCAGAACCTGTACCTGAACAACAACTGGTTCACAGGGCAGGTTCCGGGCAGCTTCGTGGAACGGTTATTGGCGGCGGGCATTCAGATACTGTATCTGCAGCACAATTTTCTTACCGGAATTGCGATAAGCCCGACGGCAGATATTCCGGTGAGCAGCACCCTATGTTTGCAGTATAACTGCATGGTTCCACCGGTTCAGACGGCGTGCCCCTTCAACGCCGGGAGGCGGAAAATCAGGCCACCTCAGCAGTGCAACCGCCGCTAA 1176 0.5425 MDVASYSLLFMCFLQSVRGILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFAGVYCANDKVVALNLGDPRAGSPGLTGKLDQSISKLSALADLTVVPGRIYGPLPNSLSQLKNLRFLGVSRNFISGEIPAGLGQLRNIKTIDLSYNQLTGTIPASIGTLPQLTNLILCHNRLSGSVPSFASAYSLTRLELKHNTLSGSLAPYSLPPSLHHLSLSWNKLTGPMDRLLTRLNRLNYLDLSLNQFTGPIPAQIFSFPLTNLQLERNQFSGPVHPVNEVTIQTVDLSYNRLSGEVSPMLASVQNLYLNNNWFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTADIPVSSTLCLQYNCMVPPVQTACPFNAGRRKIRPPQQCNRR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1523 391 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Pvu1g1523 391 PANTHER LRR RECEPTOR-LIKE KINASE 3 390 - -
Pvu1g1523 391 Gene3D Ribonuclease Inhibitor 211 278 IPR032675 -
Pvu1g1523 391 Pfam Leucine Rich repeat 212 226 IPR001611 GO:0005515
Pvu1g1523 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pvu1g1523 391 Gene3D Ribonuclease Inhibitor 279 366 IPR032675 -
Pvu1g1523 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 390 - -
Pvu1g1523 391 Gene3D Ribonuclease Inhibitor 22 210 IPR032675 -
Pvu1g1523 391 SUPERFAMILY L domain-like 32 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1523 Pvu-Chr1 39960470 39961645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1523 25 369 Receptor kinase-like Gene Family AT3G51740 32.778 8.43e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1523 - - gmx:100817314 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1523 1 39960470 39961645 Pvu1g1523 1 39960470 39961645 ECH
Pvu1g1523 1 39960470 39961645 Pvu7g1725 7 40000478 40003191 PCT