Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1513 ATGGCCAAGTCCACCTTCTTCCTTTGCCTTAACCTCTGCTTACTTATCTCTGCGGTCACCGCCAGTTACTATCAATCTCTGACCCCAACGCTGATGGGTTTCCGGGAGGACAAGTTCACCCACCTTCACTTCTTCTTCCACGACGTGGTCACGGGGCCCAACCCCAGCATGGTCATTGTGGCCGAGCCCAACGGAAAAGCCAAGGACGCCCTTCCCTTCGGAACCGTTGTGGCCATGGACGACCCCTTGACGGCGGGACCCGAACCCGACTCCAAACTGGTGGGGAAGGCGCAGGGGATTTACACTTCCATATCGCAGGCGGAAATGGGGCTCATGATGGTCATGACCATGGCCTTCACCGACGGAGAATTCAACGGCAGCACCATCAGCGTCTTGGCCAGAAACATGATCATGACCGAACCTGTGAGGGAAATGGCCATTGTTGGCGGCACTGGGGCTTTTCGCTTCGCTCGTGGCTATGCTCAGGCCAAGTTTCACTCCGTCGATTTCTCCAAAGGCGATGCCATCGTGGAATACGACGTTTTCGTCAACCACTATTAA 561 0.5561 MAKSTFFLCLNLCLLISAVTASYYQSLTPTLMGFREDKFTHLHFFFHDVVTGPNPSMVIVAEPNGKAKDALPFGTVVAMDDPLTAGPEPDSKLVGKAQGIYTSISQAEMGLMMVMTMAFTDGEFNGSTISVLARNMIMTEPVREMAIVGGTGAFRFARGYAQAKFHSVDFSKGDAIVEYDVFVNHY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1513 186 PANTHER NUCLEOPORIN-RELATED 6 185 IPR004265 -
Pvu1g1513 186 PANTHER DIRIGENT PROTEIN 6 185 - -
Pvu1g1513 186 Gene3D - 32 173 IPR044859 -
Pvu1g1513 186 Pfam Dirigent-like protein 40 183 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1513 Pvu-Chr1 39762103 39763092 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1513 - K25075 gmx:100817155 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1513 1 39762103 39763092 Pvu1g1513 1 39762103 39763092 ECH