Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1512 ATGGCTATTTGGTTCATCACCCTCACCCTACTCTTCTCCTCAGTCGCTGCAGCAGAAAATCCCGATTTCTATGAATACATATCTCCAAGTTCTCTGGGTCTCAAGAAGGAGAAGCTGCTCCACCTTCACTTCTTCTTCCATGACGTTTCGAGCGGGCCCAAACCCACCGCAGTCACGATCGCACAGGCACAGACCACGGCCAACTCATCCTCGTTTTTCGGGCTCCTGATGATAGCGGACGACCCATTGACCGTTGGGCCCGACCCTGGTTCCAAACTCGTGGGAAGGGGACAAGGACTTTACGGGTTTGCAGACCAGAAGGAAGTTGCCCTGGCGATGCTCTTTAACTTTGTGTTCACGGAAGGGAAATTCAATGGGAGCACTCTGAGCTTGTTGGGTAGGAACTTGATATTCCACGACGAGAGGGAATTGCCAATTGTTGGTGGAAGTGGGGTTTTCAAGTTTGCTCGTGGCTTTGCTCATGCCAAGAAGTATAGTCTTGATACCAAGACAGGTGACACTGTTGTGGAGTACAACTTTTACGTATTCCATTATTAG 558 0.4982 MAIWFITLTLLFSSVAAAENPDFYEYISPSSLGLKKEKLLHLHFFFHDVSSGPKPTAVTIAQAQTTANSSSFFGLLMIADDPLTVGPDPGSKLVGRGQGLYGFADQKEVALAMLFNFVFTEGKFNGSTLSLLGRNLIFHDERELPIVGGSGVFKFARGFAHAKKYSLDTKTGDTVVEYNFYVFHY* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1512 185 PANTHER NUCLEOPORIN-RELATED 5 184 IPR004265 -
Pvu1g1512 185 Gene3D - 28 184 IPR044859 -
Pvu1g1512 185 Pfam Dirigent-like protein 40 183 IPR004265 -
Pvu1g1512 185 PANTHER DIRIGENT PROTEIN 5 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1512 Pvu-Chr1 39715804 39716361 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1512 - - pvu:PHAVU_001G145500g 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1512 1 39715804 39716361 Pvu1g1512 1 39715804 39716361 ECH