Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1509 ATGGCCAACTCCAAGAGCCTCACAACCATTTTCACCATCATCGTTCTCAACCTGCTCTTCTCATTGGCCGCCGCAAAATCTCCTACGTTCTACCGAAACCTATCTGCCAAGTCTTTGGGACTCAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCACGACATTGTCAGCGGCCCAAACCCCACCGCCGTCAGAGTGGCGGAGGCCGCCTCCACCAACTCTTCCTCCACGCTTTTCGGATTCATAGCGATGATCGACGACCCATTGACCGTGGGCCCCGAACCCGGATCCAAACTAGTGGGAAAGGCCCAAGGAGTATACGGATCTGCAGCCCAAACAGAAACGGGTCTGTTGATGGTAATGAACTTCGTTTTCTCGGAAGGGAAATATAATGGCAGCACGCTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCCACCGTGAGGGAAATGCCAATCGTTGGAGGAAGCGGGGCTTTCCGGTTCGCACGTGGGTATGCTCAGGCGAAGACTCACACGTTTGATACTAAGACTGGGGATGCTGTTGTGGAGTACAACGTCTTCGTGTTCCATTATTAA 579 0.5302 MANSKSLTTIFTIIVLNLLFSLAAAKSPTFYRNLSAKSLGLKKEKLSHLHFFFHDIVSGPNPTAVRVAEAASTNSSSTLFGFIAMIDDPLTVGPEPGSKLVGKAQGVYGSAAQTETGLLMVMNFVFSEGKYNGSTLSLLGRNAVFSTVREMPIVGGSGAFRFARGYAQAKTHTFDTKTGDAVVEYNVFVFHY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1509 192 PANTHER NUCLEOPORIN-RELATED 4 191 IPR004265 -
Pvu1g1509 192 Gene3D - 34 185 IPR044859 -
Pvu1g1509 192 Pfam Dirigent-like protein 47 190 IPR004265 -
Pvu1g1509 192 PANTHER DIRIGENT PROTEIN 4 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1509 Pvu-Chr1 39643887 39644465 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1509 - - gmx:100816095 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1509 1 39643887 39644465 Pvu1g1509 1 39643887 39644465 ECH