Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1504 ATGTCTGGAAAAGCATCAACATCAAAGCTTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACATGCTTACATTCAGTATCCACCACTTCAGTGCAATGTTCCTGGATCTAGTGGATTATTTTATGATGATGGAAATAAGTTGGTACTCTCTCCAACAGTTGACCAGGTCTTTTCATGGAAAGTTGGTCCCTTTGATCCTCTCATTGATCCAATCGCTGATTCAATAAGTGAAGGCCCTATTATAGCTATTCGATATTCTTTAGACACAAAGGTGATAGCAATCCAGCGATCCAATCATGAGATGCAGTTTTGGGATAGAGAGACAGGGGGCACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATAATTGGGTTTTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACAAGTGGTCTAGACTTGTATGCATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCTTGGTTCTTCTTGCTTCCGGCATGCAGTGCAAGACATTCCACGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGATGTCTTTATTGTGACTGTTTATGGTAGGATATACTGCTTACAAGTTGATAGAATTGCTATGCTGCTCCATTCTTATCGGCTATATCGTGATGCAGTGATACAGCAGGGCTCTTTACCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTCGAGCACCTATATCTGCACCACTTCCTTTATTATTAAGGGGATTCCCCAGATCTAGTACTTCATCTCAATCGAGTGGCAGAGAAAGTGAGAGTTCAGACAGTAATGTTTTGAGTAGTCATGGAGCAGTTACATACACTAATACATGGACTTTCCTAGTGCCTGACCTCGTATGCGATGTGGCCAATAAGTTATTGTGGAAGTTCAATTTAGACTTAGAGGCAATTTCTGCCAGTAGCTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAGGTTGGAAGCGAACAAGGCTAAACAATTGTGCTTGGGTATAACACGTACACTTATTCTTGAGCACAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTTGTCACCTCATACTCCCATTCAATTAAAACTGGTAACTATCTCAAGGGACAGAAGCCTGAGAAGGCATCTGGTGATCAAAATACTGGTGCTGAGGTATCTGCTATCGAAACAGATGTAATTGGAAAATCAGTCATCCATGAATCTATGGAAAGAGTCGACCGTGGATCTCTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGATGATGAGTCTCAGTCTGCAAATCCAAAACACAATTCAAAGGAGGCCCATAGTGCTAATGTTATCCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTTACTTCCGCAGCAATTTCACCGGATGAGATGTACAGCTTTGTCTTTTCTCCTGCGGATGAAGAGATGGTGGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGACAAGATACGTGTACTCCCAAATGCTTATGTATTAATTATTCAACTTCTGGCTCGCAATGAACGTTATGCAGAGCTCGGGTTGTTTGTCCTAAACAAGATTCTGGAGCCCTCTAAGGAAGTTGCACTGCAACTCCTAGAGTCTGGTCGCCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAATTGGGTTTACATCATGATTATGTTTTGTTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTAAGATATGCACGGAAATATAGGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCGAATGACTCTCAACATCTTTCTGCGGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATATTGCCGCATACTCAATGAAATGAACTCATCCATGGCTGTTTGA 2166 0.416 MSGKASTSKLNIGLSGSDGLSHAYIQYPPLQCNVPGSSGLFYDDGNKLVLSPTVDQVFSWKVGPFDPLIDPIADSISEGPIIAIRYSLDTKVIAIQRSNHEMQFWDRETGGTFSHKCRPESESIIGFFWTDSQQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDVFIVTVYGRIYCLQVDRIAMLLHSYRLYRDAVIQQGSLPIYSNRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTSSQSSGRESESSDSNVLSSHGAVTYTNTWTFLVPDLVCDVANKLLWKFNLDLEAISASSSEVPSVLEFLQRRRLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGNYLKGQKPEKASGDQNTGAEVSAIETDVIGKSVIHESMERVDRGSLNKASTVSSLDSDDESQSANPKHNSKEAHSANVIQSSLQSGQEESQLTSAAISPDEMYSFVFSPADEEMVGDPSYLVAIIIEFLHSANSDKIRVLPNAYVLIIQLLARNERYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYRVDTIRPSLFLEAAFVSNDSQHLSAVLRFFTDFLPGFKNTSDHNRYCRILNEMNSSMAV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1504 721 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 717 IPR040371 GO:0010506|GO:0035658
Pvu1g1504 721 MobiDBLite consensus disorder prediction 481 496 - -
Pvu1g1504 721 MobiDBLite consensus disorder prediction 481 513 - -
Pvu1g1504 721 Pfam Colon cancer-associated protein Mic1-like 554 694 IPR009755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1504 K24763 - gmx:100500389 1274.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1504 1 39552276 39564633 Pvu1g1504 1 39552276 39564633 ECH