Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1497 ATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAGTTGGTCCACCGGTTGCTCTCCCAGAACCTTCCATCCAATTCTCCGCCGCTAAACCCTAACTCCCCCGAATTCCGCAACTCTCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACTCCCTCCGTCGCCCCGGACGCAGCCGCCATTGCCGACTCCATCAAGCGCCACCTCGCCACCAACGCCCGCTCTGCGGATGCCCTATCCTTTGCCGACCTCTTCTCTAAATTCGCCTCCAAAGCCCAAAGCGTCAACAATAAATGGGCCGTCATCTACCTCCTCAAAATCATCTCCGAAGATCGGAACAAGACCGCCGCCGTCGCCACCACCACACCTCTCTTGCCCAATCTCGCTTTCTCCGAACCCGCTTCAAACAAAGGCTGGAGTAACGGCGTTTTACTTGTCTCCAAGGATCCTGAGAACCGCCGCGACGTCGCGTTTCGCGAGTTCGTGGATTTGGTCAAGGAAGAAAACGAGGTGTCGGAAGAGGTTATCGTCACGGACGTGCTCTATGCTTGCCAGGGGGTCGATGGTAGGTTTGTGAAATTCGAGAGTGAGAGTAACCGTTATGTGATACCCGATTCGGTTAGGGTTCCGAGAGCTACTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGTTTTGTTTCGGAAGGTTAGTGGTTACATTTCGCAGAGTATGGATCGGTTTCCCAATGAAGATGTGGGAACTGTGGGGCAAGCTTTTTGTTCCGCTTTGCAGGATGAGTTAAGTGAGTACTATAAGTTATTGGCGGTTCTTGAGGCTCAGGCTTCGAACCCGATTCCTTTGGTGTCCGAATCTGCGAGTTCTGAGAACTACCTATCGCTGAGGAGATTGGCGGTTTGGTTGGCTGAGCCAATGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAGTGTAGGGTTTTGCGCGGCGGGGCTATGGCGGGGGCGATTCATTTGCACGCACAGCATGGTGATCCGTTGGTTCATGAGTTTATGAGGAGGTTGCTGCAGAGAGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGATGGGTTTTGGAAGGAGAGTTGGAGGATATATTTGCTGAGTTTTTTATTGTTGGGCAGCCTGTTAAGGCTGAGTCACTTTGGAGAGAAGGGTATAGTCTTCATCATGCGATGCTTCCTTTGTTCATTCCGCCTTCACTTGCGCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGACCGTGGTTGGGCGGATGCTGCGACTGAGGTTATCACTGATAATGAAGTGACAGCAAGAAGAGGTGGTTTTGGATACGGGGAAACGGATACCCTTGAGTTTTTGGTAGATAAAGCTGCAAAAAGGATTGACAAGCATTTGTTGGATGTGATTTTCACGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTGGGGCCTGAGCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTAGGGCATCTAATGCTCAGTATGACGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCACATGAGAGCGGTGATAGGGGCTGGGATGTATTTTCATTGGAATATGATGCAAGAGTTCCACTTGATACAGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTTTGGAAGCTTAGAAGAGTAGAACATGCGCTTACTGGTGCCTGGAAGACCATGAAACCAAACTGCATTACTTCTAATTCCTTTACCAGATTGGAACATGCAGTAAAGATGCAATTAGTTTCAACGTTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTTTTGGAGATATCATGGTCAAATTTTTTGGCGGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGAGAAATATCTGCATTCTATTGTAGAAAAATCTCTCCTTGGAGACCTTTCCCAGTCTCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTTCGGAGCCGTGCAGATCGATTGTATGAAGGTATTCATGAGTTGCAAGCAAGAATGACCGAATCCTCCCTTTCCTCTCGAGACCAGAAGAAAACACGATCACGAAAGCAATTGAATGATAAAACTGCAGAGCAAGGATCCTGGATTGTTGATGGGAGAAAAGCCCTAACACAACGTGCTGGTGAATTTCTAAGAAATATGGGTCAAGATCTTGGTGCAATTGCTAAGGAATATTCATCATTGCAAGAGGATTTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGACCTAAAATTTCTCTTTTTCCGTCTTGACTTTAACGAGTTTTATAGGCGGTTGTGTCCTAGCATGTAG 2532 0.4645 MEEEEDQQKLPDLVKELVHRLLSQNLPSNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRHLATNARSADALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRNKTAAVATTTPLLPNLAFSEPASNKGWSNGVLLVSKDPENRRDVAFREFVDLVKEENEVSEEVIVTDVLYACQGVDGRFVKFESESNRYVIPDSVRVPRATRSMVHNLCELGVLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSENYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYSLHHAMLPLFIPPSLAQRILRTGKSINFLRVCCEDRGWADAATEVITDNEVTARRGGFGYGETDTLEFLVDKAAKRIDKHLLDVIFTRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLEHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQARMTESSLSSRDQKKTRSRKQLNDKTAEQGSWIVDGRKALTQRAGEFLRNMGQDLGAIAKEYSSLQEDFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSM* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1497 843 Pfam Gamma tubulin complex component C-terminal 491 836 IPR040457 GO:0043015
Pvu1g1497 843 MobiDBLite consensus disorder prediction 750 766 - -
Pvu1g1497 843 MobiDBLite consensus disorder prediction 749 768 - -
Pvu1g1497 843 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 831 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Pvu1g1497 843 Gene3D - 490 835 IPR042241 -
Pvu1g1497 843 Coils Coil 259 279 - -
Pvu1g1497 843 Pfam Gamma tubulin complex component N-terminal 182 485 IPR041470 -
Pvu1g1497 843 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1497 Pvu-Chr1 39390648 39395399 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1497 K16570 - gmx:100784710 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1497 1 39390648 39395399 Pvu1g1497 1 39390648 39395399 ECH