Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1494 ATGTCTGTAATAGGGGCGTGTTCACAGTTTGTGTACAGAGAGGTTTATCAGAGAGATGAACAGTGGACACAGTGCTTGGTGAGTGGGAGAGGGTATCTCTTTTGTCACAGGAGTGGTGGGTGTGAGAACATATGGGTTGGAAGCAGACACAGAGAAAGAAAGATGAAAAGGAGAAATTTGCGTGTGGAAGCGATGTGGCCAGATTTGTCAAAATCAAGTGAGTTGCAGATGGAAGAAATCAATGATTCCGACCACCTTGATCAAATTCTTCTTCTTGCCCACGACAACTCCCAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGTATCTATTTGAAGCCCAAGGTGGAAAAATTAGCAGCTGAATATCAAAACAAAGTCAAATTTTACTGTGCGGATGTGAATAAAGTACCCCAGACTCTAGTCAAGAGAGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTGATTGGAGGCCATAAGGCCTGGCTAGTCATTGAAGAAGTCAGAGAAATGATCCAAAAGTTTTTATGA 570 0.4246 MSVIGACSQFVYREVYQRDEQWTQCLVSGRGYLFCHRSGGCENIWVGSRHRERKMKRRNLRVEAMWPDLSKSSELQMEEINDSDHLDQILLLAHDNSQPILIDWMATWCRKCIYLKPKVEKLAAEYQNKVKFYCADVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1494 189 CDD TRX_family 84 186 - -
Pvu1g1494 189 ProSiteProfiles Thioredoxin domain profile. 60 189 IPR013766 -
Pvu1g1494 189 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 188 IPR044253 GO:0009570
Pvu1g1494 189 Pfam Thioredoxin 95 174 IPR013766 -
Pvu1g1494 189 SUPERFAMILY Thioredoxin-like 75 186 IPR036249 -
Pvu1g1494 189 Gene3D Glutaredoxin 61 188 - -
Pvu1g1494 189 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1494 Pvu-Chr1 39366107 39367905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1494 - - pvu:PHAVU_001G143700g 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1494 1 39366107 39367905 Pvu1g1494 1 39366107 39367905 ECH