Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1493 ATGGCTGATGCCACCAAGTACGTTCCCATAGGTGGCACCAACCTCTCCACAGACCTCAAGACCCTCTCATCCGTTCTCAAAACCAGAAAAACAGTGGCCTTTGCATACGCTTTCATAATTGCCTTCGTCGCTTTCACTGTTTTCTTAGCCTTTTCCCCTTCTCCAAACGCTTCCTCTCCCTGGTTCACCAACATATTTTCTTCCACATCATCCCCAGATGGTTCCTTCAAGCCTCAAATCCCTGCCATTTTCTCACTCCTTTTCCCAAACACTTCTTCACCCTCCAATTCCTCTGATCCACTGCCAAACAACACTAACACTTCTAGATCTGCAAATATTAATGCCACTGCTTCTTCTCCTCATCTCAACACTACCTTAGAAACTCAAACACTCAAAGCAACCTCTTTTCTAAACCGAACACAAACCTCGGATGTTTCATCCCAAGATGCAGTTCCTTTCCCAACCACAAACCAGACCACGAATTCTCACGCTCCAAGTTTGGAGGCGAAGTCATCACCACCCCTTGTCGCTAAGGAAACATCTGGGGTTGTAAAAAATCAAACTTTTAATTCGGCTGAAGTTAAAGCTACAACCACAAATCAAACTACAAATGCTACTGCACCTGCAACACCTGCAACATCTGCAACCAATGTTTCAGTGAGTTTCCCTGTTCAGGAAGTTCCACATCAGAACTCAAGTTCTAATTCTTCTGTGAAGGCCGATTCGGTAAAGGGTGTTGCTTCGAATGATAATTACACGGCTTCTCTGGCTAGGAAACATATTAATGGGAAGAGTCACGCTAAGGGGAACGATGAATCGATGGAGTCTCTCATGAAGTGTGATTTTTTTGATGGAAAGTGGGTTAAGGATGGTTCTTATCCTCTCTATAAGCCAGGTTCTTGCTCTTTGGTAGATGAACAGTTCAATTGTATTAGGAATGGAAGGCCCGACAAGGAATATCTAACATATAAGTGGAAGCCTAAGGGTTGCAGCCTCCCAAGGTTGAATGCGCATAGAATGCTGGAATTGTTGAGAGGAAAGAAACTTGTTTTTGTTGGCGATTCGCTCAATAGGAACATGTGGGAGTCTCTGATTTGCATATTGAAAAGTGCTGTGAAGGATAAAAAGAAGGTTTATGAAGCAAATGGAAGAGTTCATTTCAGAGGCGAAGCCTCTTATTCATTTATATTCAAAGATTATCACTTCTCTGTGGAGCTTTTCGTGTCTCCATTTTTGGTTCAAGAAGGGGAAATGACTGATAAGAATGGGACAAAGAAGGAAACACTTCGTCTAGATTTAGTTGGTCAATCTTCTTCTCAATATAAAGATGCAGATATTATCATCTTCAACACTGGCCACTGGTGGACTCATGATAAAACCTCTAAAGGGCAGGACTATTACCAAGAAGGTAGCCATGTGTATTCTGAGTTAAACGTTCTTGAGGCATTCCGAAGAGCTTTAACAACTTGGAGCAGGTGGGTTGATGCCAACATTAATCCATCCAAGACAGTGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGCGGTGGACAGTGGAATTCAGGTGGGCAATGTGATAGTGAAACTGATCCAATTGACAACGAGAAGTACCTAACTCAGTATCCAGATAAGATGATTGTTTTGGAGAAGGTGCTAAAGAATATGAAAAACCGTGTGATCTACCAAAACGTGACTAGAATGACAGATTTCAGAAAGGATGGTCATCCCTCCATATACAGGAAGCAAAATCTAAGTCCTGAGGAAAGAAAATCACCATTGAGATACCAAGACTGCAGCCACTGGTGCCTTCCTGGTGTTCCTGATATATGGAATGAGATTCTCTATGCTGAACTTCTAATGAGAGAGTATCGGAATCAGCTTGAGCAGAAGAAAACTTAG 1902 0.4248 MADATKYVPIGGTNLSTDLKTLSSVLKTRKTVAFAYAFIIAFVAFTVFLAFSPSPNASSPWFTNIFSSTSSPDGSFKPQIPAIFSLLFPNTSSPSNSSDPLPNNTNTSRSANINATASSPHLNTTLETQTLKATSFLNRTQTSDVSSQDAVPFPTTNQTTNSHAPSLEAKSSPPLVAKETSGVVKNQTFNSAEVKATTTNQTTNATAPATPATSATNVSVSFPVQEVPHQNSSSNSSVKADSVKGVASNDNYTASLARKHINGKSHAKGNDESMESLMKCDFFDGKWVKDGSYPLYKPGSCSLVDEQFNCIRNGRPDKEYLTYKWKPKGCSLPRLNAHRMLELLRGKKLVFVGDSLNRNMWESLICILKSAVKDKKKVYEANGRVHFRGEASYSFIFKDYHFSVELFVSPFLVQEGEMTDKNGTKKETLRLDLVGQSSSQYKDADIIIFNTGHWWTHDKTSKGQDYYQEGSHVYSELNVLEAFRRALTTWSRWVDANINPSKTVVFFRGYSASHFSGGQWNSGGQCDSETDPIDNEKYLTQYPDKMIVLEKVLKNMKNRVIYQNVTRMTDFRKDGHPSIYRKQNLSPEERKSPLRYQDCSHWCLPGVPDIWNEILYAELLMREYRNQLEQKKT* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1493 633 Coils Coil 621 633 - -
Pvu1g1493 633 MobiDBLite consensus disorder prediction 139 175 - -
Pvu1g1493 633 MobiDBLite consensus disorder prediction 139 168 - -
Pvu1g1493 633 MobiDBLite consensus disorder prediction 94 125 - -
Pvu1g1493 633 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 332 617 IPR026057 GO:0016740
Pvu1g1493 633 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 626 IPR029962 GO:0016413
Pvu1g1493 633 MobiDBLite consensus disorder prediction 188 214 - -
Pvu1g1493 633 Pfam PMR5 N terminal Domain 279 330 IPR025846 -
Pvu1g1493 633 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 19 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1493 Pvu-Chr1 39341163 39344324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1493 - - gmx:100811425 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1493 1 39341163 39344324 Pvu7g2688 7 49912424 49916171 PCT