Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1488 ATGCAGGGAGGAAAGAAAGCAGGAGAATCCGTGAAGGAAACGGCTTCAAACATGGGTGCTTCTGCCAAAGCTGGCATGGAGAAGACTAAGGCCACTGTCCAAGAGAAGGCAGAAAGATTGACAGCACGTGATCCGTTGCAAAAGGAAGTGGCAACCCAAAAGAAGGAAGCAAGGGTCAACCAGGCCGAGCTCGACAAGCAGGCGGTGCGTGAGCATAACGCGGCGGCCAAGCAGTCGGCCACCCACTCCGCCACCGGGGAGCATGGCCATCACACAGGGCTCCACCAGACGTCGGCGATGCCAGGTCATGGAACTGGACAGCCCACGGGCCACGTGACCGAGGGAGTGGTGGGCTCGCATCCCATTGGGACCAATCGAGGCCCGGGTGGGACGACTACGGCCCATAATACCCATGCAGGTGGTAACCCGAATGATTATGGCTATGGGACTGGGGGTACTTACAATTAA 468 0.5791 MQGGKKAGESVKETASNMGASAKAGMEKTKATVQEKAERLTARDPLQKEVATQKKEARVNQAELDKQAVREHNAAAKQSATHSATGEHGHHTGLHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTTTAHNTHAGGNPNDYGYGTGGTYN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1488 155 Coils Coil 23 43 - -
Pvu1g1488 155 MobiDBLite consensus disorder prediction 1 155 - -
Pvu1g1488 155 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Pvu1g1488 155 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 154 - -
Pvu1g1488 155 MobiDBLite consensus disorder prediction 29 72 - -
Pvu1g1488 155 MobiDBLite consensus disorder prediction 125 140 - -
Pvu1g1488 155 MobiDBLite consensus disorder prediction 74 104 - -
Pvu1g1488 155 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 154 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1488 Pvu-Chr1 39263343 39264168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1488 - - gmx:547828 224.557